RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 CTNND2Q9UQB3 1225 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 GJA3Q9Y6H8 435 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 PLEKHA8P1O95397 391 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 SPAG1Q07617 926 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 CCDC181Q5TID7 509 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 WWC2Q6AWC2 1192 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 CLEC17AQ6ZS10 378 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 CTAGE1Q96RT6 745 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 XPO4Q9C0E2 1151 aaKnown RBP8.44□□□□□ -1.06
PHTF1-209ENST00000474926 PDCL3Q9H2J4 239 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
PHTF1-209ENST00000474926 ERCC3P19447 782 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 SLC44A5Q8NCS7 719 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 ERMNQ8TAM6 284 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 SH3RF3Q8TEJ3 882 aaPredicted RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 RNF26Q9BY78 433 aaPredicted RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 PCDHA5Q9Y5H7 936 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 RFX7Q2KHR2 1363 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 DDAH1O94760 285 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 KIF20AO95235 890 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 POLD1P28340 1107 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 HSP90B2PQ58FF3 399 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 C11orf57Q6ZUT1 292 aaPredicted RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 REXO1Q8N1G1 1221 aaKnown RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 FERMT2Q96AC1 680 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 MMRN2Q9H8L6 949 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 EHMT1Q9H9B1 1298 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 A0A1W2PQ27 194 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 A0A1W2PQ64 194 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 A0A1W2PQD8 194 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 CDC25AP30304 524 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 ADCY7P51828 1080 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 UBXN1Q04323 297 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 PDE4DQ08499 809 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 MLKLQ8NB16 471 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 STAG1Q8WVM7 1258 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 LY9Q9HBG7 655 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 COL5A2P05997 1499 aaPredicted RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 TBCAO75347 108 aaKnown RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 MMP1P03956 469 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 HSPA1LP34931 641 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 PLCD1P51178 756 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 KARSQ15046 597 aaKnown RBP8.43□□□□□ -1.06
PHTF1-209ENST00000474926 DPCR1Q3MIW9 517 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 USP17L2Q6R6M4 530 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 KRBA2Q6ZNG9 492 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 KRT25Q7Z3Z0 450 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 TICAM2Q86XR7 235 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 FAM114A1Q8IWE2 563 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 GRAMD1CQ8IYS0 662 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 FLAD1Q8NFF5 587 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 PRIMPOLQ96LW4 560 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 CSRNP2Q9H175 543 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 LRWD1Q9UFC0 647 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 PCDHB6Q9Y5E3 794 aa8.43□□□□□ -1.06
PHTF1-209ENST00000474926 RPAP1Q9BWH6 1393 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 JCADQ9P266 1359 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 TCP10L2B9ZVM9 353 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 MATR3P43243 847 aaKnown RBP eCLIP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 RAD51AP2Q09MP3 1159 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 DLGAP5Q15398 846 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 DYMQ7RTS9 669 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SLC4A9Q96Q91 983 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 LZTS2Q9BRK4 669 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 LRRC27Q9C0I9 530 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 CPVLQ9H3G5 476 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 CD209Q9NNX6 404 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 DCP1AQ9NPI6 582 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 NRBP1Q9UHY1 535 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 PCP11498 1178 aaKnown RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 RXRBP28702 533 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 DDIT3P35638 169 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SF3B3Q15393 1217 aaKnown RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SV2BQ7L1I2 683 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 RUFY1Q96T51 708 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 FOXP1Q9H334 677 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 COBLO75128 1261 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 TNNT3P45378 269 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 CACNB3P54284 484 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 CHMP4BP1P59074 171 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 PTPN21Q16825 1174 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SKIDA1Q1XH10 827 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SYT10Q6XYQ8 523 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SYCP3Q8IZU3 236 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 EEF2KMTQ96G04 330 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 BRIP1Q9BX63 1249 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 LZTFL1Q9NQ48 299 aa8.42□□□□□ -1.06
PHTF1-209ENST00000474926 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.42□□□□□ -1.06
PHTF1-209ENST00000474926 AKR1B10O60218 316 aa8.41□□□□□ -1.06
PHTF1-209ENST00000474926 TXNRD1Q16881 649 aa8.41□□□□□ -1.06
PHTF1-209ENST00000474926 ENAHQ8N8S7 591 aaPredicted RBP8.41□□□□□ -1.06
PHTF1-209ENST00000474926 SNX29Q8TEQ0 813 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms