RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	GOLM1	Q8NBJ4	401 aa		7.25	□□□□□ -1.25
BBX-223	ENST00000473542	GATAD2B	Q8WXI9	593 aa		7.25	□□□□□ -1.25
BBX-223	ENST00000473542	MPP2	Q14168	576 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	MLANA	Q16655	118 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	SOGA3	Q5TF21	947 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	FYB2	Q5VWT5	728 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	ZSWIM9	Q86XI8	627 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	SPACA3	Q8IXA5	215 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	LIN37	Q96GY3	246 aa	Predicted RBP	7.24	□□□□□ -1.25
BBX-223	ENST00000473542	FAM84A	Q96KN4	292 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	SLC38A3	Q99624	504 aa		7.24	□□□□□ -1.25
BBX-223	ENST00000473542	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.24	□□□□□ -1.25	3e-6	■■□□□ 11.4
BBX-223	ENST00000473542	SSU72	Q9NP77	194 aa	Known RBP	7.24	□□□□□ -1.25
BBX-223	ENST00000473542	FAM221A	A4D161	298 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542		F6X3S4	739 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	ZP2	Q05996	745 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	FAM160A1	Q05DH4	1040 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	RBL2	Q08999	1139 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	APOBR	Q0VD83	1088 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	RASIP1	Q5U651	963 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	MAP1S	Q66K74	1059 aa	Predicted RBP	7.23	□□□□□ -1.25
BBX-223	ENST00000473542	RNF214	Q8ND24	703 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	GPBAR1	Q8TDU6	330 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.23	□□□□□ -1.25
BBX-223	ENST00000473542	CSAD	Q9Y600	493 aa		7.23	□□□□□ -1.25
BBX-223	ENST00000473542	RBAK-RBAKDN	I3L0D1	243 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	CILP	O75339	1184 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	NTF4	P34130	210 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	ERVK-24	P63145	666 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	IKZF1	Q13422	519 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	KCNMB1	Q16558	191 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	NKPD1	Q17RQ9	610 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	PPM1J	Q5JR12	505 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	NKD1	Q969G9	470 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	GAL3ST3	Q96A11	431 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	KRTAP4-11	Q9BYQ6	195 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	UBP1	Q9NZI7	540 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.22	□□□□□ -1.25
BBX-223	ENST00000473542	CTNND2	Q9UQB3	1225 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	PCDHB5	Q9Y5E4	795 aa		7.22	□□□□□ -1.25
BBX-223	ENST00000473542	F13A1	P00488	732 aa		7.21	□□□□□ -1.26
BBX-223	ENST00000473542	CWF19L2	Q2TBE0	894 aa	Known RBP	7.21	□□□□□ -1.26
BBX-223	ENST00000473542	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.21	□□□□□ -1.26
BBX-223	ENST00000473542	REXO1	Q8N1G1	1221 aa	Known RBP	7.21	□□□□□ -1.26
BBX-223	ENST00000473542	CBX8	Q9HC52	389 aa		7.21	□□□□□ -1.26
BBX-223	ENST00000473542	SNX11	Q9Y5W9	270 aa		7.21	□□□□□ -1.26
BBX-223	ENST00000473542	SHROOM4	Q9ULL8	1493 aa		7.21	□□□□□ -1.26
BBX-223	ENST00000473542	BPNT1	O95861	308 aa		7.2	□□□□□ -1.26
BBX-223	ENST00000473542	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.2	□□□□□ -1.26
BBX-223	ENST00000473542	CFP	P27918	469 aa		7.2	□□□□□ -1.26
BBX-223	ENST00000473542	CRK	P46108	304 aa		7.2	□□□□□ -1.26
BBX-223	ENST00000473542	RPL6	Q02878	288 aa	Known RBP	7.2	□□□□□ -1.26
BBX-223	ENST00000473542	C1QL4	Q86Z23	238 aa		7.2	□□□□□ -1.26
BBX-223	ENST00000473542	GRIN3A	Q8TCU5	1115 aa		7.2	□□□□□ -1.26
BBX-223	ENST00000473542	GINM1	Q9NU53	330 aa		7.2	□□□□□ -1.26
BBX-223	ENST00000473542	EFR3B	Q9Y2G0	817 aa		7.2	□□□□□ -1.26
BBX-223	ENST00000473542	STK10	O94804	968 aa	Known RBP	7.19	□□□□□ -1.26
BBX-223	ENST00000473542	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.19	□□□□□ -1.26
BBX-223	ENST00000473542	NASP	P49321	788 aa	Predicted RBP	7.19	□□□□□ -1.26
BBX-223	ENST00000473542	SEPT6	Q14141	434 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	NBPF6	Q5VWK0	638 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	LCNL1	Q6ZST4	164 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	REC114	Q7Z4M0	266 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	ASB11	Q8WXH4	323 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	NBPF4	Q96M43	638 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	PRDM10	Q9NQV6	1147 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	TACC3	Q9Y6A5	838 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	PITPNM2	Q9BZ72	1349 aa		7.19	□□□□□ -1.26
BBX-223	ENST00000473542	DCDC2C	A8MYV0	355 aa		7.18	□□□□□ -1.26
BBX-223	ENST00000473542	EOMES	O95936	686 aa		7.18	□□□□□ -1.26
BBX-223	ENST00000473542	SSB	P05455	408 aa	Known RBP eCLIP	7.18	□□□□□ -1.26
BBX-223	ENST00000473542	IMPDH2	P12268	514 aa		7.18	□□□□□ -1.26
BBX-223	ENST00000473542	ZNF165	P49910	485 aa		7.18	□□□□□ -1.26
BBX-223	ENST00000473542	PRR23B	Q6ZRT6	265 aa		7.18	□□□□□ -1.26
BBX-223	ENST00000473542	DHX38	Q92620	1227 aa	Known RBP	7.18	□□□□□ -1.26
BBX-223	ENST00000473542	JARID2	Q92833	1246 aa	Predicted RBP	7.18	□□□□□ -1.26
BBX-223	ENST00000473542	SNCAIP	Q9Y6H5	919 aa		7.18	□□□□□ -1.26
BBX-223	ENST00000473542	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.17	□□□□□ -1.26
BBX-223	ENST00000473542	RAP1GAP	P47736	663 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	SEZ6	Q53EL9	994 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	C12orf40	Q86WS4	652 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.17	□□□□□ -1.26
BBX-223	ENST00000473542	ACSBG1	Q96GR2	724 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	EHMT1	Q9H9B1	1298 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	C19orf73	Q9NVV2	129 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	GTF2IRD1	Q9UHL9	959 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	CNTNAP4	Q9C0A0	1308 aa		7.17	□□□□□ -1.26
BBX-223	ENST00000473542	LOC105371045	A0A1W2PR82	267 aa		7.16	□□□□□ -1.26
BBX-223	ENST00000473542	ATE1	O95260	518 aa		7.16	□□□□□ -1.26
BBX-223	ENST00000473542	RBBP8NL	Q8NC74	664 aa	Predicted RBP	7.16	□□□□□ -1.26
BBX-223	ENST00000473542	OR6P1	Q8NGX9	317 aa		7.16	□□□□□ -1.26
BBX-223	ENST00000473542	SRRT	Q9BXP5	876 aa	Known RBP	7.16	□□□□□ -1.26
BBX-223	ENST00000473542	FAM53C	Q9NYF3	392 aa		7.16	□□□□□ -1.26
BBX-223	ENST00000473542	PRR36	Q9H6K5	1346 aa		7.16	□□□□□ -1.26
BBX-223	ENST00000473542	PRR33	A8MZF0	331 aa		7.15	□□□□□ -1.26
BBX-223	ENST00000473542	TSPAN15	O95858	294 aa		7.15	□□□□□ -1.26
BBX-223	ENST00000473542	KRT1	P04264	644 aa		7.15	□□□□□ -1.26
BBX-223	ENST00000473542	PTPN11	Q06124	597 aa	Predicted RBP	7.15	□□□□□ -1.26
BBX-223	ENST00000473542	RING1	Q06587	406 aa		7.15	□□□□□ -1.26
BBX-223	ENST00000473542	KRTAP19-4	Q3LI73	84 aa		7.15	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms