RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 AEBP2Q6ZN18 517 aaPredicted RBP28.4■■■□□ 2.14
BBX-223ENST00000473542 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
BBX-223ENST00000473542 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
BBX-223ENST00000473542 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
BBX-223ENST00000473542 FOXD1Q16676 465 aa22.56■■□□□ 1.2
BBX-223ENST00000473542 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
BBX-223ENST00000473542 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
BBX-223ENST00000473542 PIAS4Q8N2W9 510 aaPredicted RBP21.02■□□□□ 0.96
BBX-223ENST00000473542 MSH5O43196 834 aa21.01■□□□□ 0.95
BBX-223ENST00000473542 ADRA2BP18089 450 aa21■□□□□ 0.95
BBX-223ENST00000473542 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
BBX-223ENST00000473542 MAPK8IP2Q13387 824 aaPredicted RBP19.34■□□□□ 0.69
BBX-223ENST00000473542 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
BBX-223ENST00000473542 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
BBX-223ENST00000473542 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
BBX-223ENST00000473542 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
BBX-223ENST00000473542 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
BBX-223ENST00000473542 CNKSR2Q8WXI2 1034 aa18.35■□□□□ 0.53
BBX-223ENST00000473542 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
BBX-223ENST00000473542 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
BBX-223ENST00000473542 RNF39Q9H2S5 420 aa17.99■□□□□ 0.47
BBX-223ENST00000473542 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
BBX-223ENST00000473542 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
BBX-223ENST00000473542 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
BBX-223ENST00000473542 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
BBX-223ENST00000473542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.391e-7■□□□□ 8.1
BBX-223ENST00000473542 KCNA4P22459 653 aa17.4■□□□□ 0.38
BBX-223ENST00000473542 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
BBX-223ENST00000473542 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
BBX-223ENST00000473542 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
BBX-223ENST00000473542 CAPN15O75808 1086 aa16.9■□□□□ 0.3
BBX-223ENST00000473542 DSG3P32926 999 aa16.84■□□□□ 0.29
BBX-223ENST00000473542 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
BBX-223ENST00000473542 ABCB7O75027 752 aa16.57■□□□□ 0.24
BBX-223ENST00000473542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
BBX-223ENST00000473542 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
BBX-223ENST00000473542 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
BBX-223ENST00000473542 APLP2Q06481 763 aa16.5■□□□□ 0.23
BBX-223ENST00000473542 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
BBX-223ENST00000473542 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
BBX-223ENST00000473542 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
BBX-223ENST00000473542 POTEHQ6S545 545 aa16.22■□□□□ 0.19
BBX-223ENST00000473542 POLA2Q14181 598 aa16.17■□□□□ 0.18
BBX-223ENST00000473542 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
BBX-223ENST00000473542 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
BBX-223ENST00000473542 ZBTB22O15209 634 aa16.04■□□□□ 0.16
BBX-223ENST00000473542 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
BBX-223ENST00000473542 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
BBX-223ENST00000473542 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
BBX-223ENST00000473542 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
BBX-223ENST00000473542 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
BBX-223ENST00000473542 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
BBX-223ENST00000473542 REM2Q8IYK8 340 aaPredicted RBP15.53■□□□□ 0.08
BBX-223ENST00000473542 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
BBX-223ENST00000473542 PIP4P2Q8N4L2 257 aa15.37■□□□□ 0.05
BBX-223ENST00000473542 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
BBX-223ENST00000473542 FBLN2P98095 1184 aa15.33■□□□□ 0.04
BBX-223ENST00000473542 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
BBX-223ENST00000473542 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
BBX-223ENST00000473542 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
BBX-223ENST00000473542 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
BBX-223ENST00000473542 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
BBX-223ENST00000473542 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
BBX-223ENST00000473542 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
BBX-223ENST00000473542 SSUH2Q9Y2M2 353 aa15.11■□□□□ 0.01
BBX-223ENST00000473542 HAX1O00165 279 aa15.08■□□□□ 0
BBX-223ENST00000473542 CLEC11AQ9Y240 323 aa15.07■□□□□ 0
BBX-223ENST00000473542 SPDYE1Q8NFV5 336 aaPredicted RBP15.02■□□□□ -0
BBX-223ENST00000473542 EVX2Q03828 476 aa15□□□□□ -0.01
BBX-223ENST00000473542 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
BBX-223ENST00000473542 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
BBX-223ENST00000473542 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
BBX-223ENST00000473542 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
BBX-223ENST00000473542 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
BBX-223ENST00000473542 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
BBX-223ENST00000473542 GABBR2O75899 941 aa14.57□□□□□ -0.08
BBX-223ENST00000473542 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
BBX-223ENST00000473542 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
BBX-223ENST00000473542 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
BBX-223ENST00000473542 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
BBX-223ENST00000473542 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
BBX-223ENST00000473542 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
BBX-223ENST00000473542 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
BBX-223ENST00000473542 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
BBX-223ENST00000473542 LHX8Q68G74 356 aa14.22□□□□□ -0.13
BBX-223ENST00000473542 MNX1P50219 401 aaPredicted RBP14.2□□□□□ -0.14
BBX-223ENST00000473542 PROM2Q8N271 834 aa14.17□□□□□ -0.14
BBX-223ENST00000473542 GALR2O43603 387 aaPredicted RBP14.14□□□□□ -0.15
BBX-223ENST00000473542 CLCN6P51797 869 aa14.13□□□□□ -0.15
BBX-223ENST00000473542 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
BBX-223ENST00000473542 DCBLD2Q96PD2 775 aa14.11□□□□□ -0.15
BBX-223ENST00000473542 NPM1P06748 294 aaKnown RBP eCLIP14.06□□□□□ -0.16
BBX-223ENST00000473542 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
BBX-223ENST00000473542 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
BBX-223ENST00000473542 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
BBX-223ENST00000473542 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
BBX-223ENST00000473542 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
BBX-223ENST00000473542 MIER1Q8N108 512 aa13.85□□□□□ -0.19
BBX-223ENST00000473542 CCDC61Q9Y6R9 512 aa13.85□□□□□ -0.19
BBX-223ENST00000473542 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms