RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 MSANTD4Q8NCY6 345 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 GOLGA5Q8TBA6 731 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 EPSTI1Q96J88 318 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 VGLL3A8MV65 326 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 EIF3JO75822 258 aaKnown RBP16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 RHOXF2BP0C7M4 288 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 PBX1P40424 430 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 CTSWP56202 376 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 MAP3K12Q12852 859 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 CUL4BQ13620 913 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 SMYD4Q8IYR2 804 aaPredicted RBP16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 RHOXF2Q9BQY4 288 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 ABCB6Q9NP58 842 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 AATFQ9NY61 560 aaKnown RBP eCLIP16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 RAB21Q9UL25 225 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 ACRBPQ8NEB7 543 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 PAGE5Q96GU1 130 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 NID2Q14112 1375 aa16.16■□□□□ 0.18
NHLRC3-204ENST00000473371 A0A087X0B3 334 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 USP5P45974 858 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 AKAP17AQ02040 695 aaKnown RBP16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 CDKAL1Q5VV42 579 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 CDC5LQ99459 802 aaKnown RBP16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 CDHR2Q9BYE9 1310 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 PRKAB2O43741 272 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 TUBB4BP68371 445 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 FANCBQ8NB91 859 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 CCDC51Q96ER9 411 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 FAM205CA6NFA0 338 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 GSG1L2A8MUP6 293 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 FXR1P51114 621 aaKnown RBP eCLIP16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 ZNF654Q8IZM8 581 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 SPATA5Q8NB90 893 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 NAPGQ99747 312 aaPredicted RBP16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 NACAP1Q9BZK3 213 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 LRP6O75581 1613 aa16.15■□□□□ 0.18
NHLRC3-204ENST00000473371 DCCP43146 1447 aa16.14■□□□□ 0.18
NHLRC3-204ENST00000473371 CTAGE15A4D2H0 777 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 GYPCP04921 128 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 CTAGE8P0CG41 777 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 CCT6AP40227 531 aaKnown RBP16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 AEBP2Q6ZN18 517 aaPredicted RBP16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 CTAGE6Q86UF2 777 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 HOMEZQ8IX15 550 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 CTAGE4Q8IX94 777 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 TMTC2Q8N394 836 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 CHD4Q14839 1912 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 SEMA3EO15041 775 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 ACTN2P35609 894 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 HLFQ16534 295 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 LEKR1Q6ZMV7 388 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 TMTC1Q8IUR5 882 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 STAG1Q8WVM7 1258 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 SYMPKQ92797 1274 aaKnown RBP16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 SUGCTQ9HAC7 445 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 L1RE1Q9UN81 338 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 CTNND2Q9UQB3 1225 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
NHLRC3-204ENST00000473371 PPP1R3GB7ZBB8 358 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 XBP1P17861 261 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 GSDMAQ96QA5 445 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 TNS3Q68CZ2 1445 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 N4BP3O15049 544 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 COBLO75128 1261 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 SH3RF1Q7Z6J0 888 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 LPIN2Q92539 896 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 UBAC1Q9BSL1 405 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 DPYDQ12882 1025 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 WHAMMP3Q1A5X7 153 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 WWC2Q6AWC2 1192 aa16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 TRMT112Q9UI30 125 aaKnown RBP16.13■□□□□ 0.17
NHLRC3-204ENST00000473371 TNS2Q63HR2 1409 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 N4BP1O75113 896 aaKnown RBP16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 VSNL1P62760 191 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 STAMQ92783 540 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 NUP88Q99567 741 aaPredicted RBP16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 TMOD3Q9NYL9 352 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 FAN1Q9Y2M0 1017 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 ITIH6Q6UXX5 1313 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 ABL1P00519 1130 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 KRT2P35908 639 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 HSP90B2PQ58FF3 399 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms