RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 GJA3Q9Y6H8 435 aa9.73□□□□□ -0.85
GTF3A-206ENST00000470606 MYH15Q9Y2K3 1946 aa9.73□□□□□ -0.85
GTF3A-206ENST00000470606 VEGFAP15692 232 aaPredicted RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 IFNAR1P17181 557 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 LMNB1P20700 586 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 RCAN1P53805 252 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 HMGN5P82970 282 aaKnown RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 RTN1Q16799 776 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 MICALL2Q8IY33 904 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 STAG2Q8N3U4 1231 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 TMEM39BQ9GZU3 492 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 PI4KBQ9UBF8 816 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 CNOT7Q9UIV1 285 aaKnown RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 HDAC9Q9UKV0 1011 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 PLIN4Q96Q06 1357 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 hCG_1642624A0A1W2PR95 340 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 CPLX1O14810 134 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 TBC1D10BQ4KMP7 808 aaPredicted RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 MCTP1Q6DN14 999 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 TATDN1Q6P1N9 297 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 SIAH1Q8IUQ4 282 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 ZSCAN29Q8IWY8 852 aaPredicted RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 CRACR2BQ8N4Y2 399 aaPredicted RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 SRBD1Q8N5C6 995 aaKnown RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 DPF2Q92785 391 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 DHX36Q9H2U1 1008 aaKnown RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 GDPD2Q9HCC8 539 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 MTMR4Q9NYA4 1195 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 STX8Q9UNK0 236 aa9.72□□□□□ -0.85
GTF3A-206ENST00000470606 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
GTF3A-206ENST00000470606 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.86
GTF3A-206ENST00000470606 PDCP20941 246 aa9.71□□□□□ -0.86
GTF3A-206ENST00000470606 RPS12P25398 132 aaKnown RBP9.71□□□□□ -0.86
GTF3A-206ENST00000470606 EIF6P56537 245 aaKnown RBP9.71□□□□□ -0.86
GTF3A-206ENST00000470606 DNM1Q05193 864 aaKnown RBP9.71□□□□□ -0.86
GTF3A-206ENST00000470606 RESTQ13127 1097 aa9.71□□□□□ -0.86
GTF3A-206ENST00000470606 PKN1Q16512 942 aa9.71□□□□□ -0.86
GTF3A-206ENST00000470606 CATIPQ7Z7H3 387 aa9.71□□□□□ -0.86
GTF3A-206ENST00000470606 CSRNP1Q96S65 589 aa9.71□□□□□ -0.86
GTF3A-206ENST00000470606 VEZTQ9HBM0 779 aa9.71□□□□□ -0.86
GTF3A-206ENST00000470606 SWAP70Q9UH65 585 aa9.71□□□□□ -0.86
GTF3A-206ENST00000470606 DDAH1O94760 285 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 FMNL1O95466 1100 aaPredicted RBP9.7□□□□□ -0.86
GTF3A-206ENST00000470606 HLA-DOAP06340 250 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 EPS15P42566 896 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 HIRAP54198 1017 aaPredicted RBP9.7□□□□□ -0.86
GTF3A-206ENST00000470606 FKBP1CQ5VVH2 108 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 SYNE3Q6ZMZ3 975 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 TMTC3Q6ZXV5 915 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 FBXO18Q8NFZ0 1043 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 FAM151AQ8WW52 585 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 TEPSINQ96N21 525 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 GBP4Q96PP9 640 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 SLC26A6Q9BXS9 759 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 CPVLQ9H3G5 476 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 ZNF287Q9HBT7 754 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 MAD2L2Q9UI95 211 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 CNPY2Q9Y2B0 182 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 KIF28PB7ZC32 967 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 CYTH3O43739 400 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 DDNO94850 711 aaPredicted RBP9.7□□□□□ -0.86
GTF3A-206ENST00000470606 GDF11O95390 407 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 NT5C2P49902 561 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 FOXP4Q8IVH2 680 aaPredicted RBP9.7□□□□□ -0.86
GTF3A-206ENST00000470606 KAT14Q9H8E8 782 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 GPRC5DQ9NZD1 345 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.7□□□□□ -0.86
GTF3A-206ENST00000470606 MTMR7Q9Y216 660 aa9.7□□□□□ -0.86
GTF3A-206ENST00000470606 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 ADAMTS3O15072 1205 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 GRM4Q14833 912 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 MIGA2Q7L4E1 593 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 FAM83AQ86UY5 434 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 LRRC47Q8N1G4 583 aaKnown RBP9.69□□□□□ -0.86
GTF3A-206ENST00000470606 ALG1Q9BT22 464 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 TAOK2Q9UL54 1235 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 STK36Q9NRP7 1315 aa9.69□□□□□ -0.86
GTF3A-206ENST00000470606 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 SMCHD1A6NHR9 2005 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 SSRP1Q08945 709 aaKnown RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 RASA3Q14644 834 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 SEPT2Q15019 361 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 CERKLQ49MI3 558 aaPredicted RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 KRT40Q6A162 431 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 GPC2Q8N158 579 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 C8orf76Q96K31 380 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 FTOQ9C0B1 505 aaKnown RBP eCLIP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 RNF181Q9P0P0 153 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 CLIP2Q9UDT6 1046 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 HACL1Q9UJ83 578 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms