RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 EVX2Q03828 476 aa13.97□□□□□ -0.17
FAM228B-203ENST00000469867 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
FAM228B-203ENST00000469867 SLFNL1Q499Z3 407 aa13.97□□□□□ -0.17
FAM228B-203ENST00000469867 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
FAM228B-203ENST00000469867 GCC1Q96CN9 775 aa13.97□□□□□ -0.17
FAM228B-203ENST00000469867 TXNRD2Q9NNW7 524 aa13.97□□□□□ -0.17
FAM228B-203ENST00000469867 MAGEB6P1A0A0J9YX57 407 aa13.97□□□□□ -0.17
FAM228B-203ENST00000469867 CERS3Q8IU89 383 aa13.97□□□□□ -0.17
FAM228B-203ENST00000469867 ZNF532Q9HCE3 1301 aa13.96□□□□□ -0.17
FAM228B-203ENST00000469867 NKX2-3Q8TAU0 364 aa13.96□□□□□ -0.17
FAM228B-203ENST00000469867 PXYLP1Q8TE99 480 aa13.96□□□□□ -0.17
FAM228B-203ENST00000469867 SDR42E1Q8WUS8 393 aa13.96□□□□□ -0.17
FAM228B-203ENST00000469867 PANK2Q9BZ23 570 aa13.96□□□□□ -0.17
FAM228B-203ENST00000469867 BOLA2Q9H3K6 86 aa13.96□□□□□ -0.17
FAM228B-203ENST00000469867 COL6A3P12111 3177 aa13.96□□□□□ -0.17
FAM228B-203ENST00000469867 C19orf81C9J6K1 198 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 HOXA7P31268 230 aaPredicted RBP13.96□□□□□ -0.18
FAM228B-203ENST00000469867 HERVK_113P62684 666 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 IRF5Q13568 498 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 TATDN1Q6P1N9 297 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 TTC6Q86TZ1 520 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 DEFB118Q96PH6 123 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 FEZ1Q99689 392 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 GZF1Q9H116 711 aaPredicted RBP13.96□□□□□ -0.18
FAM228B-203ENST00000469867 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.18
FAM228B-203ENST00000469867 CHGBP05060 677 aa13.95□□□□□ -0.18
FAM228B-203ENST00000469867 POLR3DP05423 398 aaPredicted RBP13.95□□□□□ -0.18
FAM228B-203ENST00000469867 CERKLQ49MI3 558 aaPredicted RBP13.95□□□□□ -0.18
FAM228B-203ENST00000469867 DPF3Q92784 378 aa13.95□□□□□ -0.18
FAM228B-203ENST00000469867 ZMYND15Q9H091 742 aa13.95□□□□□ -0.18
FAM228B-203ENST00000469867 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
FAM228B-203ENST00000469867 PAGR1Q9BTK6 254 aa13.95□□□□□ -0.18
FAM228B-203ENST00000469867 EHD4Q9H223 541 aa13.95□□□□□ -0.18
FAM228B-203ENST00000469867 H0YGN5 161 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 SGPL1O95470 568 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
FAM228B-203ENST00000469867 LCORLQ8N3X6 602 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 ACER1Q8TDN7 264 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 CRNKL1Q9BZJ0 848 aaKnown RBP13.94□□□□□ -0.18
FAM228B-203ENST00000469867 PAG1Q9NWQ8 432 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
FAM228B-203ENST00000469867 TCRBV5S4A2TA0A5A2 114 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 SHMT1P34896 483 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 Q3C1V9 767 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 TSHZ3Q63HK5 1081 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 POTEEQ6S8J3 1075 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 ARMT1Q9H993 441 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 GINM1Q9NU53 330 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 RBPJLQ9UBG7 517 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 MORF4L1Q9UBU8 362 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 TRIM32Q13049 653 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 GPRC5AQ8NFJ5 357 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 PORCNQ9H237 461 aa13.93□□□□□ -0.18
FAM228B-203ENST00000469867 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
FAM228B-203ENST00000469867 FARP2O94887 1054 aaPredicted RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 TFRCP02786 760 aaKnown RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 CYP2B6P20813 491 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 TMED8Q6PL24 325 aaPredicted RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 UBE2Q1Q7Z7E8 422 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 SLC44A5Q8NCS7 719 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 DCP1AQ9NPI6 582 aaPredicted RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 MPHOSPH10O00566 681 aaKnown RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 PRKAB2O43741 272 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 CYP2D6P10635 497 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 USP17L2Q6R6M4 530 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 PLEKHM2Q8IWE5 1019 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 CCAR1Q8IX12 1150 aaKnown RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 NAP1L5Q96NT1 182 aaPredicted RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 LRRCC1Q9C099 1032 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 CABP5Q9NP86 173 aa13.92□□□□□ -0.18
FAM228B-203ENST00000469867 PAK6Q9NQU5 681 aaPredicted RBP13.92□□□□□ -0.18
FAM228B-203ENST00000469867 ATP5JP18859 108 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 VCAM1P19320 739 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 ERVK-9P63128 1117 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 ERVK-24P63145 666 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 GABPAQ06546 454 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 SEPT2Q15019 361 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 TRIB2Q92519 343 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 MBD4O95243 580 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 HMGCRP04035 888 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 GSPT1P15170 499 aaKnown RBP13.91□□□□□ -0.18
FAM228B-203ENST00000469867 GUCY1A2P33402 732 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 DYNLL2Q96FJ2 89 aa13.91□□□□□ -0.18
FAM228B-203ENST00000469867 ADD2P35612 726 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 HAUS7Q99871 368 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 NAV1Q8NEY1 1877 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 WDR78Q5VTH9 848 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 NUDT12Q9BQG2 462 aa13.9□□□□□ -0.18
FAM228B-203ENST00000469867 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
FAM228B-203ENST00000469867 DDX60LQ5H9U9 1706 aaKnown RBP13.9□□□□□ -0.18
FAM228B-203ENST00000469867 BAZ2AQ9UIF9 1905 aaKnown RBP13.9□□□□□ -0.18
FAM228B-203ENST00000469867 A0A1W2PRG0 241 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 XRCC6P12956 609 aaKnown RBP eCLIP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms