RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 DEXIO95424 95 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 UBE2HP62256 183 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 PRMT6Q96LA8 375 aaPredicted RBP21.05■□□□□ 0.96
SMC4-211ENST00000469858 SPATA32Q96LK8 384 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 FAM198AQ9UFP1 575 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 TMTC3Q6ZXV5 915 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 RGS22Q8NE09 1264 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 GMLQ99445 158 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 RNF26Q9BY78 433 aaPredicted RBP21.05■□□□□ 0.96
SMC4-211ENST00000469858 SWAP70Q9UH65 585 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 HDAC9Q9UKV0 1011 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
SMC4-211ENST00000469858 KIF23Q02241 960 aaPredicted RBP21.04■□□□□ 0.96
SMC4-211ENST00000469858 JDP2Q8WYK2 163 aa21.04■□□□□ 0.96
SMC4-211ENST00000469858 CFAP45Q9UL16 551 aa21.04■□□□□ 0.96
SMC4-211ENST00000469858 ELP1O95163 1332 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 KIF28PB7ZC32 967 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 CEBPZQ03701 1054 aaKnown RBP21.03■□□□□ 0.96
SMC4-211ENST00000469858 FUT2Q10981 343 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 ZSCAN29Q8IWY8 852 aaPredicted RBP21.03■□□□□ 0.96
SMC4-211ENST00000469858 OGFOD1Q8N543 542 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 LEO1Q8WVC0 666 aaPredicted RBP21.03■□□□□ 0.96
SMC4-211ENST00000469858 TMEM47Q9BQJ4 181 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 ARFGEF1Q9Y6D6 1849 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 KIF5BP33176 963 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 CXCL9Q07325 125 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 NLGN2Q8NFZ4 835 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 CEP95Q96GE4 821 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 ZNF396Q96N95 335 aaPredicted RBP21.03■□□□□ 0.96
SMC4-211ENST00000469858 DHX36Q9H2U1 1008 aaKnown RBP21.03■□□□□ 0.96
SMC4-211ENST00000469858 MTMR7Q9Y216 660 aa21.03■□□□□ 0.96
SMC4-211ENST00000469858 BAZ2BQ9UIF8 2168 aaKnown RBP21.02■□□□□ 0.96
SMC4-211ENST00000469858 DDTLA6NHG4 134 aaPredicted RBP21.02■□□□□ 0.96
SMC4-211ENST00000469858 BRAPQ7Z569 592 aa21.02■□□□□ 0.96
SMC4-211ENST00000469858 FTOQ9C0B1 505 aaKnown RBP eCLIP21.02■□□□□ 0.96
SMC4-211ENST00000469858 EHD4Q9H223 541 aa21.02■□□□□ 0.96
SMC4-211ENST00000469858 TMEM63CQ9P1W3 806 aa21.02■□□□□ 0.96
SMC4-211ENST00000469858 PLIN4Q96Q06 1357 aa21.02■□□□□ 0.96
SMC4-211ENST00000469858 CNTNAP5Q8WYK1 1306 aa21.02■□□□□ 0.95
SMC4-211ENST00000469858 hCG_1642624A0A1W2PR95 340 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
SMC4-211ENST00000469858 SLURP2P0DP57 97 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 AKR1B1P15121 316 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 SHMT1P34896 483 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 GNL2Q13823 731 aaKnown RBP21.01■□□□□ 0.95
SMC4-211ENST00000469858 SRBD1Q8N5C6 995 aaKnown RBP21.01■□□□□ 0.95
SMC4-211ENST00000469858 USP28Q96RU2 1077 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 SPDYE2BA6NHP3 402 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 PRPF3O43395 683 aaKnown RBP21.01■□□□□ 0.95
SMC4-211ENST00000469858 SPDYE6P0CI01 402 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 DLGAP5Q15398 846 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 CIAPIN1Q6FI81 312 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 SH3BP5LQ7L8J4 393 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 AGBL3Q8NEM8 1001 aa21.01■□□□□ 0.95
SMC4-211ENST00000469858 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMC4-211ENST00000469858 V9GY48 417 aaPredicted RBP21.01■□□□□ 0.95
SMC4-211ENST00000469858 RASSF7Q02833 373 aa21■□□□□ 0.95
SMC4-211ENST00000469858 ZSCAN23Q3MJ62 389 aa21■□□□□ 0.95
SMC4-211ENST00000469858 ATL3Q6DD88 541 aa21■□□□□ 0.95
SMC4-211ENST00000469858 MAP3K14Q99558 947 aa21■□□□□ 0.95
SMC4-211ENST00000469858 TMOD2Q9NZR1 351 aa21■□□□□ 0.95
SMC4-211ENST00000469858 PI4KBQ9UBF8 816 aa21■□□□□ 0.95
SMC4-211ENST00000469858 KCNJ14Q9UNX9 436 aa21■□□□□ 0.95
SMC4-211ENST00000469858 FAM196BA6NMK8 535 aa20.99■□□□□ 0.95
SMC4-211ENST00000469858 GRM4Q14833 912 aa20.99■□□□□ 0.95
SMC4-211ENST00000469858 PKN1Q16512 942 aa20.99■□□□□ 0.95
SMC4-211ENST00000469858 DNAJC18Q9H819 358 aa20.99■□□□□ 0.95
SMC4-211ENST00000469858 CLRN2A0PK11 232 aa20.99■□□□□ 0.95
SMC4-211ENST00000469858 MYSM1Q5VVJ2 828 aa20.99■□□□□ 0.95
SMC4-211ENST00000469858 STAG2Q8N3U4 1231 aa20.99■□□□□ 0.95
SMC4-211ENST00000469858 GREB1LQ9C091 1923 aaPredicted RBP20.99■□□□□ 0.95
SMC4-211ENST00000469858 ENTPD3O75355 529 aa20.98■□□□□ 0.95
SMC4-211ENST00000469858 MMP1P03956 469 aa20.98■□□□□ 0.95
SMC4-211ENST00000469858 TOP1P11387 765 aaKnown RBP20.98■□□□□ 0.95
SMC4-211ENST00000469858 SYAP1Q96A49 352 aaPredicted RBP20.98■□□□□ 0.95
SMC4-211ENST00000469858 TRIM34Q9BYJ4 488 aa20.98■□□□□ 0.95
SMC4-211ENST00000469858 MAD2L2Q9UI95 211 aa20.98■□□□□ 0.95
SMC4-211ENST00000469858 LTBP3Q9NS15 1303 aa20.98■□□□□ 0.95
SMC4-211ENST00000469858 GOLGA6L4A6NEF3 574 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 MPHOSPH10O00566 681 aaKnown RBP20.97■□□□□ 0.95
SMC4-211ENST00000469858 SAFBQ15424 915 aaKnown RBP eCLIP20.97■□□□□ 0.95
SMC4-211ENST00000469858 CLEC10AQ8IUN9 316 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 PIBF1Q8WXW3 757 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 MTMR4Q9NYA4 1195 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 VPS54Q9P1Q0 977 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 MYH4Q9Y623 1939 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 ATRNL1Q5VV63 1379 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 IGKV6D-41A0A0C4DH26 115 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 TCP10L2B9ZVM9 353 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 XBP1P17861 261 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 NOVP48745 357 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 EIF6P56537 245 aaKnown RBP20.97■□□□□ 0.95
SMC4-211ENST00000469858 RASGRP2Q7LDG7 609 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 SPON1Q9HCB6 807 aa20.97■□□□□ 0.95
SMC4-211ENST00000469858 ZNF70Q9UC06 446 aaPredicted RBP20.97■□□□□ 0.95
SMC4-211ENST00000469858 U2AF2P26368 475 aaKnown RBP eCLIP20.96■□□□□ 0.956e-7■■■■■ 34.1
SMC4-211ENST00000469858 DIS3L2Q8IYB7 885 aaKnown RBP20.96■□□□□ 0.95
SMC4-211ENST00000469858 RCOR1Q9UKL0 485 aa20.96■□□□□ 0.95
SMC4-211ENST00000469858 GOLGA6L3A6NEY3 463 aa20.96■□□□□ 0.95
SMC4-211ENST00000469858 GNAQP50148 359 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms