RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 TSPY2A6NKD2 308 aa18.86■□□□□ 0.61
AGRN-204ENST00000466223 USP14P54578 494 aa18.86■□□□□ 0.61
AGRN-204ENST00000466223 BACE1P56817 501 aa18.86■□□□□ 0.61
AGRN-204ENST00000466223 TFAP4Q01664 338 aa18.86■□□□□ 0.61
AGRN-204ENST00000466223 ICA1Q05084 483 aa18.86■□□□□ 0.61
AGRN-204ENST00000466223 PRRT2Q7Z6L0 340 aaPredicted RBP18.86■□□□□ 0.61
AGRN-204ENST00000466223 BRI3BPQ8WY22 251 aa18.86■□□□□ 0.61
AGRN-204ENST00000466223 ORC4O43929 436 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 TRPA1O75762 1119 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 GUCY1A2P33402 732 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 NT5C2P49902 561 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 HMGCS2P54868 508 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 ATP2B2Q01814 1243 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 MTMR2Q13614 643 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 FAM47AQ5JRC9 791 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 PPP4R3BQ5MIZ7 849 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 PROCA1Q8NCQ7 364 aaPredicted RBP18.85■□□□□ 0.61
AGRN-204ENST00000466223 STAG1Q8WVM7 1258 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 RNF186Q9NXI6 227 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 SAGE1Q9NXZ1 904 aa18.85■□□□□ 0.61
AGRN-204ENST00000466223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.85■□□□□ 0.61
AGRN-204ENST00000466223 FGRP09769 529 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 HSPA1AP0DMV8 641 aaKnown RBP18.84■□□□□ 0.61
AGRN-204ENST00000466223 HSPA1BP0DMV9 641 aaKnown RBP18.84■□□□□ 0.61
AGRN-204ENST00000466223 TRDNQ13061 729 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 PABPC4Q13310 644 aaKnown RBP eCLIP18.84■□□□□ 0.61
AGRN-204ENST00000466223 SH3D19Q5HYK7 790 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 USP17L2Q6R6M4 530 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 ANKRD23Q86SG2 305 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 NEDD1Q8NHV4 660 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 ESR2Q92731 530 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 PTPN18Q99952 460 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 LSG1Q9H089 658 aaKnown RBP18.84■□□□□ 0.61
AGRN-204ENST00000466223 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
AGRN-204ENST00000466223 INCENPQ9NQS7 918 aa18.84■□□□□ 0.61
AGRN-204ENST00000466223 RBM8AQ9Y5S9 174 aaKnown RBP18.84■□□□□ 0.61
AGRN-204ENST00000466223 BTBD19C9JJ37 291 aa18.83■□□□□ 0.6
AGRN-204ENST00000466223 IGF2BP3O00425 579 aaKnown RBP eCLIP18.83■□□□□ 0.6
AGRN-204ENST00000466223 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.6
AGRN-204ENST00000466223 REC8O95072 547 aa18.83■□□□□ 0.6
AGRN-204ENST00000466223 TNS4Q8IZW8 715 aa18.83■□□□□ 0.6
AGRN-204ENST00000466223 KRT23Q9C075 422 aa18.83■□□□□ 0.6
AGRN-204ENST00000466223 CNNM2Q9H8M5 875 aa18.83■□□□□ 0.6
AGRN-204ENST00000466223 LAMA4Q16363 1823 aa18.83■□□□□ 0.6
AGRN-204ENST00000466223 EEF2P13639 858 aaKnown RBP18.82■□□□□ 0.6
AGRN-204ENST00000466223 ZYXQ15942 572 aaKnown RBP18.82■□□□□ 0.6
AGRN-204ENST00000466223 RNF20Q5VTR2 975 aa18.82■□□□□ 0.6
AGRN-204ENST00000466223 TBC1D10CQ8IV04 446 aa18.82■□□□□ 0.6
AGRN-204ENST00000466223 ACER1Q8TDN7 264 aa18.82■□□□□ 0.6
AGRN-204ENST00000466223 KIAA1683Q9H0B3 1180 aa18.82■□□□□ 0.6
AGRN-204ENST00000466223 PTPRFP10586 1907 aa18.82■□□□□ 0.6
AGRN-204ENST00000466223 PDHXO00330 501 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 CAPN15O75808 1086 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 TTLL1O95922 423 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 CYP21A2P08686 494 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 TAF1CQ15572 869 aaPredicted RBP18.81■□□□□ 0.6
AGRN-204ENST00000466223 FAM43AQ8N2R8 423 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.81■□□□□ 0.6
AGRN-204ENST00000466223 NBPF3Q9H094 633 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 ZFYVE28Q9HCC9 887 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 NYAP2Q9P242 653 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 PNMA3Q9UL41 463 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 AGTPBP1Q9UPW5 1226 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 SLC45A1Q9Y2W3 748 aa18.81■□□□□ 0.6
AGRN-204ENST00000466223 OSBPP22059 807 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
AGRN-204ENST00000466223 MOGSQ13724 837 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
AGRN-204ENST00000466223 IQCA1Q86XH1 822 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 CEP95Q96GE4 821 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 GOPCQ9HD26 462 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 EMILIN3Q9NT22 766 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 MTMR4Q9NYA4 1195 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 TMX2Q9Y320 296 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 PLIN4Q96Q06 1357 aa18.8■□□□□ 0.6
AGRN-204ENST00000466223 A0A1W2PRG0 241 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 RAD21O60216 631 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 TBC1D8O95759 1140 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 CCDC178Q5BJE1 867 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 GPAT2Q6NUI2 795 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 CLEC10AQ8IUN9 316 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 C12orf42Q96LP6 360 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 PARK7Q99497 189 aaKnown RBP18.79■□□□□ 0.6
AGRN-204ENST00000466223 STX8Q9UNK0 236 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 TACC3Q9Y6A5 838 aa18.79■□□□□ 0.6
AGRN-204ENST00000466223 NEDD4P46934 1319 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 IGKV6D-41A0A0C4DH26 115 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 B4E1Z4 1266 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 FOXN1O15353 648 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 KDM4AO75164 1064 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 TREML2Q5T2D2 321 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 SIAH1Q8IUQ4 282 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 NCOA7Q8NI08 942 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 LPAR1Q92633 364 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 MKL1Q969V6 931 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 CFHR5Q9BXR6 569 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 VCPKMTQ9H867 229 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 TCP11L1Q9NUJ3 509 aa18.78■□□□□ 0.6
AGRN-204ENST00000466223 GREB1LQ9C091 1923 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms