RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
SLX4-202ENST00000466154 MYH14Q7Z406 1995 aaKnown RBP18.67■□□□□ 0.58
SLX4-202ENST00000466154 GPKOWQ92917 476 aaPredicted RBP eCLIP18.67■□□□□ 0.58
SLX4-202ENST00000466154 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
SLX4-202ENST00000466154 A0A087X0B3 334 aa18.67■□□□□ 0.58
SLX4-202ENST00000466154 RASGRP4Q8TDF6 673 aa18.67■□□□□ 0.58
SLX4-202ENST00000466154 THRAP3Q9Y2W1 955 aaKnown RBP18.67■□□□□ 0.58
SLX4-202ENST00000466154 SRPRBQ9Y5M8 271 aaKnown RBP18.67■□□□□ 0.58
SLX4-202ENST00000466154 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
SLX4-202ENST00000466154 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
SLX4-202ENST00000466154 DCP1AQ9NPI6 582 aaPredicted RBP18.66■□□□□ 0.58
SLX4-202ENST00000466154 DIXDC1Q155Q3 683 aa18.66■□□□□ 0.58
SLX4-202ENST00000466154 SAP30BPQ9UHR5 308 aaKnown RBP18.66■□□□□ 0.58
SLX4-202ENST00000466154 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
SLX4-202ENST00000466154 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
SLX4-202ENST00000466154 PTGDRQ13258 359 aa18.66■□□□□ 0.58
SLX4-202ENST00000466154 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
SLX4-202ENST00000466154 PLIN2Q99541 437 aa18.66■□□□□ 0.58
SLX4-202ENST00000466154 ZNF804BA4D1E1 1349 aa18.66■□□□□ 0.58
SLX4-202ENST00000466154 SF3B3Q15393 1217 aaKnown RBP18.65■□□□□ 0.58
SLX4-202ENST00000466154 ADAMTS3O15072 1205 aa18.65■□□□□ 0.58
SLX4-202ENST00000466154 TROAPQ12815 778 aa18.65■□□□□ 0.58
SLX4-202ENST00000466154 TTC38Q5R3I4 469 aa18.65■□□□□ 0.58
SLX4-202ENST00000466154 AMIGO3Q86WK7 504 aa18.65■□□□□ 0.58
SLX4-202ENST00000466154 MKNK2Q9HBH9 465 aa18.65■□□□□ 0.58
SLX4-202ENST00000466154 URI1O94763 535 aaPredicted RBP18.64■□□□□ 0.58
SLX4-202ENST00000466154 MDM2Q00987 491 aaPredicted RBP18.64■□□□□ 0.58
SLX4-202ENST00000466154 LRRN4CLQ8ND94 238 aa18.64■□□□□ 0.58
SLX4-202ENST00000466154 ANKRD7Q92527 254 aa18.64■□□□□ 0.58
SLX4-202ENST00000466154 STX8Q9UNK0 236 aa18.64■□□□□ 0.58
SLX4-202ENST00000466154 ROBO1Q9Y6N7 1651 aa18.64■□□□□ 0.58
SLX4-202ENST00000466154 TFAP4Q01664 338 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 DESI2Q9BSY9 194 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 CCNL1Q9UK58 526 aaPredicted RBP18.64■□□□□ 0.57
SLX4-202ENST00000466154 BAZ2AQ9UIF9 1905 aaKnown RBP18.64■□□□□ 0.57
SLX4-202ENST00000466154 VSTM4Q8IW00 320 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 SLC44A5Q8NCS7 719 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 PHF20Q9BVI0 1012 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 BRIP1Q9BX63 1249 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 INTS13Q9NVM9 706 aa18.64■□□□□ 0.57
SLX4-202ENST00000466154 PES1O00541 588 aaKnown RBP18.63■□□□□ 0.57
SLX4-202ENST00000466154 ACTN4O43707 911 aaKnown RBP18.63■□□□□ 0.57
SLX4-202ENST00000466154 CPVLQ9H3G5 476 aa18.63■□□□□ 0.57
SLX4-202ENST00000466154 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
SLX4-202ENST00000466154 MYH2Q9UKX2 1941 aa18.63■□□□□ 0.57
SLX4-202ENST00000466154 TMTC3Q6ZXV5 915 aa18.63■□□□□ 0.57
SLX4-202ENST00000466154 DACH1Q9UI36 760 aa18.63■□□□□ 0.57
SLX4-202ENST00000466154 USP17L3A6NCW0 530 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 USP17L4A6NCW7 530 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 PRPF3O43395 683 aaKnown RBP18.62■□□□□ 0.57
SLX4-202ENST00000466154 SLU7O95391 586 aaKnown RBP18.62■□□□□ 0.57
SLX4-202ENST00000466154 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 USP17L1Q7RTZ2 530 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 CCDC34Q96HJ3 373 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 RTCBQ9Y3I0 505 aaKnown RBP18.62■□□□□ 0.57
SLX4-202ENST00000466154 GOLGA8HP0CJ92 632 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 CCT6AP40227 531 aaKnown RBP18.62■□□□□ 0.57
SLX4-202ENST00000466154 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 RBM28Q9NW13 759 aaKnown RBP18.62■□□□□ 0.57
SLX4-202ENST00000466154 KARSQ15046 597 aaKnown RBP18.62■□□□□ 0.57
SLX4-202ENST00000466154 MLKLQ8NB16 471 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
SLX4-202ENST00000466154 MAPKAPK5Q8IW41 473 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 STAG2Q8N3U4 1231 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 PAGE5Q96GU1 130 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 BAG1Q99933 345 aaPredicted RBP18.61■□□□□ 0.57
SLX4-202ENST00000466154 FAM237AA0A1B0GTK4 181 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 TEX33O43247 280 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 RFC4P35249 363 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 RASGRP2Q7LDG7 609 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 NYXQ9GZU5 481 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 FUT2Q10981 343 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 MORC3Q14149 939 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 NFIXQ14938 502 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 CTNND2Q9UQB3 1225 aa18.61■□□□□ 0.57
SLX4-202ENST00000466154 LDHBP07195 334 aaKnown RBP18.6■□□□□ 0.57
SLX4-202ENST00000466154 CALM1P0DP23 149 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 CALM2P0DP24 149 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 CALM3P0DP25 149 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 SCG2P13521 617 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 CD44P16070 742 aaKnown RBP18.6■□□□□ 0.57
SLX4-202ENST00000466154 GRIK5Q16478 980 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 SH3RF3Q8TEJ3 882 aaPredicted RBP18.6■□□□□ 0.57
SLX4-202ENST00000466154 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
SLX4-202ENST00000466154 VAT1LQ9HCJ6 419 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 KANK3Q6NY19 840 aa18.6■□□□□ 0.57
SLX4-202ENST00000466154 COL16A1Q07092 1604 aaPredicted RBP18.6■□□□□ 0.57
SLX4-202ENST00000466154 SPECC1LQ69YQ0 1117 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 ZBTB9Q96C00 473 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 EEF2KMTQ96G04 330 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 MED15Q96RN5 788 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 CHD4Q14839 1912 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 CNTNAP5Q8WYK1 1306 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 TSPY3P0CV98 308 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 TSPY8P0CW00 308 aa18.59■□□□□ 0.57
SLX4-202ENST00000466154 GNG11P61952 73 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms