RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 LIG3P49916 1009 aa5.59□□□□□ -1.51
SCN3A-206ENST00000465043 PRAMEF13Q5VWM6 474 aa5.59□□□□□ -1.51
SCN3A-206ENST00000465043 SLC6A19Q695T7 634 aa5.59□□□□□ -1.51
SCN3A-206ENST00000465043 MRPL41Q8IXM3 137 aaKnown RBP5.59□□□□□ -1.51
SCN3A-206ENST00000465043 BHLHE22Q8NFJ8 381 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-206ENST00000465043 PIWIL2Q8TC59 973 aaKnown RBP5.59□□□□□ -1.51
SCN3A-206ENST00000465043 SLC38A3Q99624 504 aa5.59□□□□□ -1.51
SCN3A-206ENST00000465043 ADAM30Q9UKF2 790 aa5.59□□□□□ -1.51
SCN3A-206ENST00000465043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-206ENST00000465043 ABCA5Q8WWZ7 1642 aa5.59□□□□□ -1.52
SCN3A-206ENST00000465043 IFT140Q96RY7 1462 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 ERCC3P19447 782 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 DAB2P98082 770 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 XPCQ01831 940 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-206ENST00000465043 RPL6Q02878 288 aaKnown RBP5.58□□□□□ -1.52
SCN3A-206ENST00000465043 TAF1CQ15572 869 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-206ENST00000465043 KCNMB1Q16558 191 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 NKG7Q16617 165 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-206ENST00000465043 HSPA12BQ96MM6 686 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 PARP2Q9UGN5 583 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 CTNND2Q9UQB3 1225 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 CAPN6Q9Y6Q1 641 aa5.58□□□□□ -1.52
SCN3A-206ENST00000465043 PGRP06401 933 aa5.57□□□□□ -1.52
SCN3A-206ENST00000465043 TRIM26Q12899 539 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-206ENST00000465043 SEPT6Q14141 434 aa5.57□□□□□ -1.52
SCN3A-206ENST00000465043 CDKAL1Q5VV42 579 aa5.57□□□□□ -1.52
SCN3A-206ENST00000465043 TMPRSS7Q7RTY8 843 aa5.57□□□□□ -1.52
SCN3A-206ENST00000465043 TMC4Q7Z404 712 aa5.57□□□□□ -1.52
SCN3A-206ENST00000465043 KSR1Q8IVT5 923 aa5.57□□□□□ -1.52
SCN3A-206ENST00000465043 SEMA3GQ9NS98 782 aa5.57□□□□□ -1.52
SCN3A-206ENST00000465043 BPNT1O95861 308 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 GDNFP39905 211 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 PWP1Q13610 501 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 MCATQ8IVS2 390 aaKnown RBP5.56□□□□□ -1.52
SCN3A-206ENST00000465043 CRELD1Q96HD1 420 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 TMEM87BQ96K49 555 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 FAM84AQ96KN4 292 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 CARS2Q9HA77 564 aaKnown RBP5.56□□□□□ -1.52
SCN3A-206ENST00000465043 ATP13A1Q9HD20 1204 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 PCDHB5Q9Y5E4 795 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 ST14Q9Y5Y6 855 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 ARAP1Q96P48 1450 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 CUL7Q14999 1698 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 PBRM1Q86U86 1689 aa5.56□□□□□ -1.52
SCN3A-206ENST00000465043 LRRC10BA6NIK2 292 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 CBX7O95931 251 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 TFE3P19532 575 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-206ENST00000465043 YARSP54577 528 aaKnown RBP5.55□□□□□ -1.52
SCN3A-206ENST00000465043 JAG1P78504 1218 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 MAP3K11Q16584 847 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 AEBP1Q8IUX7 1158 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 BCL11AQ9H165 835 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 TRIT1Q9H3H1 467 aaKnown RBP5.55□□□□□ -1.52
SCN3A-206ENST00000465043 MRS2Q9HD23 443 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 PRDM7Q9NQW5 492 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 TJP2Q9UDY2 1190 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 GRIN2BQ13224 1484 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 ARHGAP35Q9NRY4 1499 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
SCN3A-206ENST00000465043 SNAPC4Q5SXM2 1469 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 PRR33A8MZF0 331 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 H3BS24 57 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 GLI1P08151 1106 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 RAC2P15153 192 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 CDK8P49336 464 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 LMNB2Q03252 620 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 ZNF648Q5T619 568 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-206ENST00000465043 MEI1Q5TIA1 1274 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 PHC3Q8NDX5 983 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 UBE2FQ969M7 185 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 KIRREL1Q96J84 757 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 PPP1R16BQ96T49 567 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 VPS8Q8N3P4 1428 aa5.54□□□□□ -1.52
SCN3A-206ENST00000465043 DBX1A6NMT0 343 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 SORBS3O60504 671 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 TMEM67Q5HYA8 995 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 DNAJC14Q6Y2X3 702 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-206ENST00000465043 RIN3Q8TB24 985 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 XAGE3Q8WTP9 111 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 CYB5D2Q8WUJ1 264 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 ALPK1Q96QP1 1244 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 ZSWIM5Q9P217 1185 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 KCNH3Q9ULD8 1083 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 CEP131Q9UPN4 1083 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 FHAD1B1AJZ9 1412 aa5.53□□□□□ -1.52
SCN3A-206ENST00000465043 EIF4G3O43432 1585 aaKnown RBP5.53□□□□□ -1.52
SCN3A-206ENST00000465043 ADAMTS12P58397 1594 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 FHOD3Q2V2M9 1422 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 CILPO75339 1184 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 TNK2Q07912 1038 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 TMEM201Q5SNT2 666 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 CDH24Q86UP0 819 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 RELL1Q8IUW5 271 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 DNAJB8Q8NHS0 232 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 GATAD2BQ8WXI9 593 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 JARID2Q92833 1246 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-206ENST00000465043 GPATCH2Q9NW75 528 aa5.52□□□□□ -1.53
SCN3A-206ENST00000465043 ZNF503-AS2A6NEH8 195 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms