RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 MYL5Q02045 173 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 POSTNQ15063 836 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 ZNF827Q17R98 1081 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 HSP90AA4PQ58FG1 418 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 TMTC3Q6ZXV5 915 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 GPR101Q96P66 508 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 MAN1B1Q9UKM7 699 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 CNTNAP5Q8WYK1 1306 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 ADAMTS3O15072 1205 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 NPHP1O15259 732 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 KRT2P35908 639 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 GRIK5Q16478 980 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 FANCLQ9NW38 375 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 IMPACTQ9P2X3 320 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 PDS5AQ29RF7 1337 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 LY75O60449 1722 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 A0A087X0B3 334 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 ORC4O43929 436 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 GSDMDP57764 484 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 NFIXQ14938 502 aa21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 RBM28Q9NW13 759 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-210ENST00000464987 ZNF592Q92610 1267 aa21.42■■□□□ 1.02
TSPAN4-210ENST00000464987 EPSTI1Q96J88 318 aa21.42■■□□□ 1.02
TSPAN4-210ENST00000464987 ATP8A2Q9NTI2 1148 aa21.42■■□□□ 1.02
TSPAN4-210ENST00000464987 ACTN4O43707 911 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 PCP11498 1178 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 XBP1P17861 261 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 FNBP4Q8N3X1 1017 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 ZNF579Q8NAF0 562 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 MCM9Q9NXL9 1143 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 USP21Q9UK80 565 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 DDAH1O94760 285 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 UBASH3AP57075 661 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 NYAP1Q6ZVC0 841 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 DZIP1Q86YF9 867 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 CCAR2Q8N163 923 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 ANKIB1Q9P2G1 1089 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 THSD7AQ9UPZ6 1657 aa21.41■■□□□ 1.02
TSPAN4-210ENST00000464987 TRIM75PA6NK02 468 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 TMEM232C9JQI7 657 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 SARSP49591 514 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 FMR1Q06787 632 aaKnown RBP eCLIP21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 CEP135Q66GS9 1140 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 RCSD1Q6JBY9 416 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 TNFRSF25Q93038 417 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 BCL11BQ9C0K0 894 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 CEP131Q9UPN4 1083 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 TSPY2A6NKD2 308 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 SERPINC1P01008 464 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 CALM1P0DP23 149 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 CALM2P0DP24 149 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 CALM3P0DP25 149 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 DIXDC1Q155Q3 683 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 ZNF174Q15697 407 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 DYNLL2Q96FJ2 89 aa21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 ARPP21Q9UBL0 812 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-210ENST00000464987 CTIFO43310 598 aaKnown RBP21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 CASP1P29466 404 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 RFC4P35249 363 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 GOLGA8FQ08AF8 430 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 GOLGA8DPQ0D2H9 430 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 NT5DC1Q5TFE4 455 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 E4F1Q66K89 784 aaPredicted RBP21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 ELOA2Q8IYF1 753 aaPredicted RBP21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 CTCFLQ8NI51 663 aaPredicted RBP21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 CFAP100Q494V2 611 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 SBK1Q52WX2 424 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 TRMT44Q8IYL2 757 aaKnown RBP21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 DHX58Q96C10 678 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 MED15Q96RN5 788 aa21.39■■□□□ 1.01
TSPAN4-210ENST00000464987 SFPQP23246 707 aaKnown RBP eCLIP21.38■■□□□ 1.012e-6■■■■□ 23.9
TSPAN4-210ENST00000464987 PTPN14Q15678 1187 aa21.38■■□□□ 1.01
TSPAN4-210ENST00000464987 FAM196AQ6ZSG2 479 aa21.38■■□□□ 1.01
TSPAN4-210ENST00000464987 SH3RF3Q8TEJ3 882 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-210ENST00000464987 INTS13Q9NVM9 706 aa21.38■■□□□ 1.01
TSPAN4-210ENST00000464987 MKRN1Q9UHC7 482 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-210ENST00000464987 CDK5RAP2Q96SN8 1893 aa21.38■■□□□ 1.01
TSPAN4-210ENST00000464987 MORC3Q14149 939 aa21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 CCDC150Q8NCX0 1101 aa21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 SMARCE1Q969G3 411 aa21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 MAP7D2Q96T17 732 aa21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 IL17RBQ9NRM6 502 aa21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 GRAPQ13588 217 aa21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 NAA30Q147X3 362 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 TRAPPC3LQ5T215 181 aa21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 GRAPLQ8TC17 118 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 SYMPKQ92797 1274 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-210ENST00000464987 AFMP43652 599 aa21.36■■□□□ 1.01
TSPAN4-210ENST00000464987 TFAP4Q01664 338 aa21.36■■□□□ 1.01
TSPAN4-210ENST00000464987 LRRC4BQ9NT99 713 aa21.36■■□□□ 1.01
TSPAN4-210ENST00000464987 HOOK1Q9UJC3 728 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-210ENST00000464987 LDHBP07195 334 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-210ENST00000464987 C12orf60Q5U649 245 aa21.36■■□□□ 1.01
TSPAN4-210ENST00000464987 NAV1Q8NEY1 1877 aa21.35■■□□□ 1.01
TSPAN4-210ENST00000464987 SCG2P13521 617 aa21.35■■□□□ 1.01
TSPAN4-210ENST00000464987 USP5P45974 858 aa21.35■■□□□ 1.01
TSPAN4-210ENST00000464987 TTC38Q5R3I4 469 aa21.35■■□□□ 1.01
TSPAN4-210ENST00000464987 PIK3AP1Q6ZUJ8 805 aa21.35■■□□□ 1.01
TSPAN4-210ENST00000464987 STAG2Q8N3U4 1231 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms