RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
PKP4-206ENST00000452162 KRT23Q9C075 422 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
PKP4-206ENST00000452162 ZNF408Q9H9D4 720 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 DDX19AQ9NUU7 478 aaKnown RBP12.45□□□□□ -0.42
PKP4-206ENST00000452162 DACT1Q9NYF0 836 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 ZSWIM5Q9P217 1185 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 KDM4AO75164 1064 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 BTDP43251 543 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 GSTO1P78417 241 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 HS1BP3Q53T59 392 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 TMEM67Q5HYA8 995 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 CST9Q5W186 159 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 RBM43Q6ZSC3 357 aaKnown RBP12.45□□□□□ -0.42
PKP4-206ENST00000452162 MFSD6Q6ZSS7 791 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 CDCA5Q96FF9 252 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 DEFB129Q9H1M3 183 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 CLSTN2Q9H4D0 955 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 GPR75-ASB3A0A0A6YYF3 556 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 CELF2O95319 508 aaKnown RBP12.44□□□□□ -0.42
PKP4-206ENST00000452162 CLCN1P35523 988 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 MAP3K11Q16584 847 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 OTUD7BQ6GQQ9 843 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 USP40Q9NVE5 1235 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 ANAPC4Q9UJX5 808 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 ZBTB43O43298 467 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 LDHCP07864 332 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 CDC27P30260 824 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 NFIAQ12857 509 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 RASA3Q14644 834 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 BICD2Q8TD16 824 aa12.44□□□□□ -0.42
PKP4-206ENST00000452162 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
PKP4-206ENST00000452162 IFIT3O14879 490 aaKnown RBP12.43□□□□□ -0.42
PKP4-206ENST00000452162 NR1I2O75469 434 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 CDKL5O76039 1030 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 CEBPZQ03701 1054 aaKnown RBP12.43□□□□□ -0.42
PKP4-206ENST00000452162 PPARAQ07869 468 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 NTRK3Q16288 839 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 MTA3Q9BTC8 594 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 AATFQ9NY61 560 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■□□□ 14.3
PKP4-206ENST00000452162 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 CCDC192P0DO97 292 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 RXRAP19793 462 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 RHBDL3P58872 404 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 MICU3Q86XE3 530 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 TMEM39BQ9GZU3 492 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 TNMDQ9H2S6 317 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 RTEL1Q9NZ71 1219 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 TMOD2Q9NZR1 351 aa12.43□□□□□ -0.42
PKP4-206ENST00000452162 TMEM88BA6NKF7 163 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 GOLGA8AA7E2F4 631 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
PKP4-206ENST00000452162 TNFAIP1Q13829 316 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 CAMK4Q16566 473 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 RNF41Q9H4P4 317 aaPredicted RBP12.42□□□□□ -0.42
PKP4-206ENST00000452162 GJB4Q9NTQ9 266 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
PKP4-206ENST00000452162 IGSF3O75054 1194 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 DYNLL1P63167 89 aaKnown RBP12.42□□□□□ -0.42
PKP4-206ENST00000452162 TCP10Q12799 353 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 NBPF12Q5TAG4 269 aaPredicted RBP12.42□□□□□ -0.42
PKP4-206ENST00000452162 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
PKP4-206ENST00000452162 TEPSINQ96N21 525 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 MYL10Q9BUA6 226 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
PKP4-206ENST00000452162 STK36Q9NRP7 1315 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 CCDC69A6NI79 296 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 KIF28PB7ZC32 967 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 WDHD1O75717 1129 aaPredicted RBP12.41□□□□□ -0.42
PKP4-206ENST00000452162 TYRO3Q06418 890 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 RRP12Q5JTH9 1297 aaKnown RBP12.41□□□□□ -0.42
PKP4-206ENST00000452162 FKBP1CQ5VVH2 108 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 ZSCAN30Q86W11 494 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 ZFPM1Q8IX07 1006 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
PKP4-206ENST00000452162 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 GOLPH3LQ9H4A5 285 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 DDX4Q9NQI0 724 aaKnown RBP12.41□□□□□ -0.42
PKP4-206ENST00000452162 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 MRVI1Q9Y6F6 885 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 SSC5DA1L4H1 1573 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 TNNI2P48788 182 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 PPP4CP60510 307 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 MYSM1Q5VVJ2 828 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 FAM83AQ86UY5 434 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 CCAR1Q8IX12 1150 aaKnown RBP12.41□□□□□ -0.42
PKP4-206ENST00000452162 CCDC144CPQ8IYA2 1237 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 PHKBQ93100 1093 aa12.41□□□□□ -0.42
PKP4-206ENST00000452162 PPP2R3BQ9Y5P8 575 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms