RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 PRKAB2O43741 272 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 CYP2D6P10635 497 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 GJA8P48165 433 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 SEPT2Q15019 361 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 KIAA1683Q9H0B3 1180 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 UNC93B1Q9H1C4 597 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
PTPRN-206ENST00000442029 SLC4A4Q9Y6R1 1079 aa17.39■□□□□ 0.37
PTPRN-206ENST00000442029 MAPK4P31152 587 aa17.38■□□□□ 0.37
PTPRN-206ENST00000442029 ERVK-9P63128 1117 aa17.38■□□□□ 0.37
PTPRN-206ENST00000442029 ERVK-24P63145 666 aa17.38■□□□□ 0.37
PTPRN-206ENST00000442029 TMEM179Q6ZVK1 233 aa17.38■□□□□ 0.37
PTPRN-206ENST00000442029 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
PTPRN-206ENST00000442029 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
PTPRN-206ENST00000442029 TXNRD2Q9NNW7 524 aa17.38■□□□□ 0.37
PTPRN-206ENST00000442029 MYH4Q9Y623 1939 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 VCAM1P19320 739 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 EVX2Q03828 476 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 SLC44A5Q8NCS7 719 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 U2AF1L4Q8WU68 220 aaKnown RBP17.37■□□□□ 0.37
PTPRN-206ENST00000442029 SHISA4Q96DD7 197 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
PTPRN-206ENST00000442029 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 RBPJLQ9UBG7 517 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 PARP14Q460N5 1801 aa17.37■□□□□ 0.37
PTPRN-206ENST00000442029 ERC2O15083 957 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 SGPL1O95470 568 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 HMGCRP04035 888 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 CHGBP05060 677 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 GUCY1A2P33402 732 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 CCNA1P78396 465 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
PTPRN-206ENST00000442029 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 CATSPERGQ6ZRH7 1159 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 SOCS4Q8WXH5 440 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 PUS7LQ9H0K6 701 aaKnown RBP17.36■□□□□ 0.37
PTPRN-206ENST00000442029 ARHGEF10LQ9HCE6 1279 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
PTPRN-206ENST00000442029 COL11A1P12107 1806 aaPredicted RBP17.35■□□□□ 0.37
PTPRN-206ENST00000442029 ZNFX1Q9P2E3 1918 aaKnown RBP17.35■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L12C9JPN9 530 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L21D6R901 530 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 PEX10O60683 326 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 TFRCP02786 760 aaKnown RBP17.35■□□□□ 0.37
PTPRN-206ENST00000442029 CAPN2P17655 700 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 CYP2B6P20813 491 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 C12orf60Q5U649 245 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 WDR78Q5VTH9 848 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 CCDC17Q96LX7 622 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 HTATIP2Q9BUP3 242 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
PTPRN-206ENST00000442029 SH2D4AQ9H788 454 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 ARPP21Q9UBL0 812 aaPredicted RBP17.35■□□□□ 0.37
PTPRN-206ENST00000442029 GJD2Q9UKL4 321 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 RABGAP1Q9Y3P9 1069 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 TTC41PQ6P2S7 1318 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 RLFQ13129 1914 aa17.35■□□□□ 0.37
PTPRN-206ENST00000442029 CYP2D7A0A087X1C5 515 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 GLRX3O76003 335 aaKnown RBP17.34■□□□□ 0.37
PTPRN-206ENST00000442029 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
PTPRN-206ENST00000442029 ZFYP08048 801 aaPredicted RBP17.34■□□□□ 0.37
PTPRN-206ENST00000442029 CDK8P49336 464 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 ICA1Q05084 483 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 Q3C1V9 767 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 GPR142Q7Z601 462 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 PLEKHH3Q7Z736 793 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 APPBP2Q92624 585 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 DPF3Q92784 378 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 TANGO6Q9C0B7 1094 aa17.34■□□□□ 0.37
PTPRN-206ENST00000442029 RNF113AO15541 343 aaKnown RBP17.33■□□□□ 0.36
PTPRN-206ENST00000442029 AKR1B1P15121 316 aa17.33■□□□□ 0.36
PTPRN-206ENST00000442029 RGS2P41220 211 aa17.33■□□□□ 0.36
PTPRN-206ENST00000442029 C16orf86Q6ZW13 317 aa17.33■□□□□ 0.36
PTPRN-206ENST00000442029 TRMT44Q8IYL2 757 aaKnown RBP17.33■□□□□ 0.36
PTPRN-206ENST00000442029 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPRN-206ENST00000442029 PORCNQ9H237 461 aa17.33■□□□□ 0.36
PTPRN-206ENST00000442029 HMX1Q9NP08 348 aaPredicted RBP17.33■□□□□ 0.36
PTPRN-206ENST00000442029 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
PTPRN-206ENST00000442029 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
PTPRN-206ENST00000442029 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
PTPRN-206ENST00000442029 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
PTPRN-206ENST00000442029 CTR9Q6PD62 1173 aa17.32■□□□□ 0.36
PTPRN-206ENST00000442029 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
PTPRN-206ENST00000442029 CRBNQ96SW2 442 aa17.32■□□□□ 0.36
PTPRN-206ENST00000442029 PAK6Q9NQU5 681 aaPredicted RBP17.32■□□□□ 0.36
PTPRN-206ENST00000442029 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
PTPRN-206ENST00000442029 IVNS1ABPQ9Y6Y0 642 aa17.32■□□□□ 0.36
PTPRN-206ENST00000442029 FRMPD3Q5JV73 1810 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms