RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 NKX2-3Q8TAU0 364 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 PRDM5Q9NQX1 630 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 ZNF277Q9NRM2 450 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 SSX2IPQ9Y2D8 614 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 CACNA1FO60840 1977 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 PDE4DQ08499 809 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 TFCP2Q12800 502 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 CAGE1Q8TC20 777 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 ORC3Q9UBD5 711 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 CALML3P27482 149 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 CDR1P51861 262 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 RARSP54136 660 aaKnown RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 GUCY1B3Q02153 619 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 CERKLQ49MI3 558 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 PPFIBP1Q86W92 1011 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 C8orf58Q8NAV2 365 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 NUP98P52948 1817 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 DDNO94850 711 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 SERPINC1P01008 464 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 PDIA4P13667 645 aaKnown RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 CTSWP56202 376 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 TAF1CQ15572 869 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 KIF4BQ2VIQ3 1234 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 KIAA1841Q6NSI8 718 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 RSBN1LQ6PCB5 846 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 NLRX1Q86UT6 975 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 ZNF594Q96JF6 807 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 MRIQ9BWK5 157 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 UPF3BQ9BZI7 483 aaKnown RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 TRPC6Q9Y210 931 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 VIL1P09327 827 aaKnown RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 DPF3Q92784 378 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 SPATA32Q96LK8 384 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 MEIS3Q99687 375 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 GLT8D2Q9H1C3 349 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 MACROD2A1Z1Q3 448 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 TRIM75PA6NK02 468 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 TNPO2O14787 897 aaKnown RBP8.24□□□□□ -1.09
CNOT4-206ENST00000428680 SEMA3EO15041 775 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 KRT13P13646 458 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 LRRC45Q96CN5 670 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 PHACTR3Q96KR7 559 aa8.24□□□□□ -1.09
CNOT4-206ENST00000428680 KLF18A0A0U1RQI7 1052 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 CELF2O95319 508 aaKnown RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 ITGBL1O95965 494 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 MCMDC2Q4G0Z9 681 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 IFT74Q96LB3 600 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 NAP1L5Q96NT1 182 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 BICC1Q9H694 974 aaKnown RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 CNOT7Q9UIV1 285 aaKnown RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 GOLGA6L3A6NEY3 463 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 CTNNA2P26232 953 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 GCKRQ14397 625 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 FKBP1CQ5VVH2 108 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 SUSD4Q5VX71 490 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 TTLL7Q6ZT98 887 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 ADD3Q9UEY8 706 aaKnown RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 RPAP1Q9BWH6 1393 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 RNF113AO15541 343 aaKnown RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 GMPSP49915 693 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 KRT79Q5XKE5 535 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 CACNA2D4Q7Z3S7 1137 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 TRMT44Q8IYL2 757 aaKnown RBP8.23□□□□□ -1.09
CNOT4-206ENST00000428680 NEK1Q96PY6 1258 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 CLIP2Q9UDT6 1046 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 SNED1Q8TER0 1413 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 GYG1P46976 350 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 ICA1Q05084 483 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 KRT24Q2M2I5 525 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 USH1GQ495M9 461 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 KMT5BQ4FZB7 885 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 FKBP15Q5T1M5 1219 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 MFSD14CQ5VZR4 134 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 HS2ST1Q7LGA3 356 aa8.23□□□□□ -1.09
CNOT4-206ENST00000428680 TMOD1P28289 359 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 NFKBIBQ15653 356 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 Q3C1V9 767 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 METTL13Q8N6R0 699 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 NBPF26B4DH59 902 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 POTEB2H3BUK9 544 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 PRDM1O75626 825 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 FAM13AO94988 1023 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 SLC10A3P09131 477 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 VEGFBP49765 207 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 KLHL10Q6JEL2 608 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
CNOT4-206ENST00000428680 FERMT3Q86UX7 667 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 ZNF592Q92610 1267 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 TESPA1A2RU30 521 aaPredicted RBP8.22□□□□□ -1.09
CNOT4-206ENST00000428680 KIF28PB7ZC32 967 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 ECE2O60344 883 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 ABCB5Q2M3G0 1257 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 ARHGEF16Q5VV41 709 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 NAP1L4Q99733 375 aaKnown RBP8.22□□□□□ -1.09
CNOT4-206ENST00000428680 HMG20BQ9P0W2 317 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms