RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 PRC1O43663 620 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 CRKP46108 304 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 NOVP48745 357 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 TDO2P48775 406 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 GABPAQ06546 454 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 CDC42EP5Q6NZY7 148 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 SLC17A8Q8NDX2 589 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 TEKT1Q969V4 418 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 ZNF333Q96JL9 665 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 TMEM87BQ96K49 555 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 TMEM106CQ9BVX2 250 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 EFCC1Q9HA90 598 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 ANGEL1Q9UNK9 670 aaKnown RBP9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 ZDHHC9Q9Y397 364 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 MYO3BQ8WXR4 1341 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 SSC5DA1L4H1 1573 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 CYP2D7A0A087X1C5 515 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 B4E1Z4 1266 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 SH2B2O14492 632 aaPredicted RBP9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 CYP2D6P10635 497 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 INHBEP58166 350 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 TRDNQ13061 729 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 CRHR2Q13324 411 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 RAB3GAP1Q15042 981 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 SEC23AQ15436 765 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 TEX11Q8IYF3 940 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 SMARCC2Q8TAQ2 1214 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 TGFBRAP1Q8WUH2 860 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 BRF1Q92994 677 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 WNK4Q96J92 1243 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 CLMNQ96JQ2 1002 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 LLPHQ9BRT6 129 aaKnown RBP9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 LY9Q9HBG7 655 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 TCP11L1Q9NUJ3 509 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 MYH13Q9UKX3 1938 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 NID2Q14112 1375 aa9.5□□□□□ -0.89
AP001042.1-201ENST00000416842 GABBR2O75899 941 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 CTDNEP1O95476 244 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 BRD1O95696 1058 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 ZBTB48P10074 688 aaPredicted RBP9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 PLCD1P51178 756 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 RCAN1P53805 252 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 C16orf86Q6ZW13 317 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 CHST3Q7LGC8 479 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 APOBEC3FQ8IUX4 373 aaKnown RBP9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 TMTC2Q8N394 836 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 RGS22Q8NE09 1264 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 GTF3C6Q969F1 213 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 SLC10A4Q96EP9 437 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 NOL10Q9BSC4 688 aaKnown RBP9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 LRRC2Q9BYS8 371 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 DDX4Q9NQI0 724 aaKnown RBP9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 FAM217BQ9NTX9 383 aaPredicted RBP9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 USP40Q9NVE5 1235 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 FLT1P17948 1338 aa9.49□□□□□ -0.89
AP001042.1-201ENST00000416842 MYH2Q9UKX2 1941 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 LAMA4Q16363 1823 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 MINDY4BA8MYZ0 360 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 KDM4AO75164 1064 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 PDIA4P13667 645 aaKnown RBP9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 GJA5P36382 358 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 USP5P45974 858 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 NUCB2P80303 420 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 SP3Q02447 781 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 SCRN1Q12765 414 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 MAP3K11Q16584 847 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 SLC4A8Q2Y0W8 1093 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 FKBP1CQ5VVH2 108 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 RALYLQ86SE5 291 aaKnown RBP9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 KIAA0825Q8IV33 1275 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 OGFOD1Q8N543 542 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 NECAB1Q8N987 351 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 ESR2Q92731 530 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 CHMP4CQ96CF2 233 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 PRMT6Q96LA8 375 aaPredicted RBP9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 SLKQ9H2G2 1235 aaPredicted RBP9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 SENP2Q9HC62 589 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 MCM9Q9NXL9 1143 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 FAM198AQ9UFP1 575 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 PCDHAC2Q9Y5I4 1007 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 PTCH2Q9Y6C5 1203 aa9.48□□□□□ -0.89
AP001042.1-201ENST00000416842 F8W031 263 aaPredicted RBP9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 ENTPD3O75355 529 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 SLC3A2P08195 630 aaKnown RBP9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 RASA1P20936 1047 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 CDK8P49336 464 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 NFIAQ12857 509 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 NTRK3Q16288 839 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms