RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 PKN1Q16512 942 aa17.31■□□□□ 0.36
COL25A1-203ENST00000399132 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
COL25A1-203ENST00000399132 RBM43Q6ZSC3 357 aaKnown RBP17.31■□□□□ 0.36
COL25A1-203ENST00000399132 STAG2Q8N3U4 1231 aa17.31■□□□□ 0.36
COL25A1-203ENST00000399132 PDILTQ8N807 584 aa17.31■□□□□ 0.36
COL25A1-203ENST00000399132 CTCFLQ8NI51 663 aaPredicted RBP17.31■□□□□ 0.36
COL25A1-203ENST00000399132 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
COL25A1-203ENST00000399132 KIF20AO95235 890 aa17.31■□□□□ 0.36
COL25A1-203ENST00000399132 PTPAQ15257 358 aa17.31■□□□□ 0.36
COL25A1-203ENST00000399132 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
COL25A1-203ENST00000399132 GPKOWQ92917 476 aaPredicted RBP eCLIP17.3■□□□□ 0.36
COL25A1-203ENST00000399132 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
COL25A1-203ENST00000399132 WNT7AO00755 349 aa17.3■□□□□ 0.36
COL25A1-203ENST00000399132 RCSD1Q6JBY9 416 aa17.3■□□□□ 0.36
COL25A1-203ENST00000399132 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
COL25A1-203ENST00000399132 KAT14Q9H8E8 782 aa17.3■□□□□ 0.36
COL25A1-203ENST00000399132 ZKSCAN5Q9Y2L8 839 aa17.3■□□□□ 0.36
COL25A1-203ENST00000399132 PDS5AQ29RF7 1337 aaKnown RBP17.29■□□□□ 0.36
COL25A1-203ENST00000399132 STK36Q9NRP7 1315 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 VGLL3A8MV65 326 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
COL25A1-203ENST00000399132 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
COL25A1-203ENST00000399132 ZNF444Q8N0Y2 327 aaPredicted RBP17.29■□□□□ 0.36
COL25A1-203ENST00000399132 BECN2A8MW95 431 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 FOXN1O15353 648 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 SRGNP10124 158 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 SYKP43405 635 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 GSTO1P78417 241 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 DPCR1Q3MIW9 517 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
COL25A1-203ENST00000399132 NRBP1Q9UHY1 535 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 PARP3Q9Y6F1 533 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 ECM29Q5VYK3 1845 aa17.29■□□□□ 0.36
COL25A1-203ENST00000399132 GOLGA6L19H0YKK7 550 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 ORC4O43929 436 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 FUT2Q10981 343 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 PNOCQ13519 176 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
COL25A1-203ENST00000399132 USP49Q70CQ1 688 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 AMOTL1Q8IY63 956 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 NLGN1Q8N2Q7 840 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 AOPEPQ8N6M6 819 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 A0A1W2PQ27 194 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 A0A1W2PQ64 194 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 A0A1W2PQD8 194 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 FGRP09769 529 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 CHRNA5P30532 468 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 STX1AQ16623 288 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 TMTC3Q6ZXV5 915 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 PNMA1Q8ND90 353 aa17.28■□□□□ 0.36
COL25A1-203ENST00000399132 LDHCP07864 332 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 IL1R1P14778 569 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
COL25A1-203ENST00000399132 AKT1S1Q96B36 256 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.36
COL25A1-203ENST00000399132 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.36
COL25A1-203ENST00000399132 PCDHAC2Q9Y5I4 1007 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 CMA1P23946 247 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 SBK1Q52WX2 424 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 GRAMD1CQ8IYS0 662 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 CERS5Q8N5B7 392 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 RASGRP4Q8TDF6 673 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
COL25A1-203ENST00000399132 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.35
COL25A1-203ENST00000399132 CACNB3P54284 484 aa17.27■□□□□ 0.35
COL25A1-203ENST00000399132 ZNF174Q15697 407 aa17.27■□□□□ 0.35
COL25A1-203ENST00000399132 LONRF3Q496Y0 759 aa17.27■□□□□ 0.35
COL25A1-203ENST00000399132 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.35
COL25A1-203ENST00000399132 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.35
COL25A1-203ENST00000399132 ATP6V0A2Q9Y487 856 aa17.27■□□□□ 0.35
COL25A1-203ENST00000399132 FLT1P17948 1338 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 CTAGE5O15320 804 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 ZNF500O60304 480 aaPredicted RBP17.26■□□□□ 0.35
COL25A1-203ENST00000399132 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 CNTNAP5Q8WYK1 1306 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 RXRBP28702 533 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 NLRP5P59047 1200 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 EN1Q05925 392 aaPredicted RBP17.26■□□□□ 0.35
COL25A1-203ENST00000399132 PLCD3Q8N3E9 789 aa17.26■□□□□ 0.35
COL25A1-203ENST00000399132 XBP1P17861 261 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 PTGS1P23219 599 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 KRT2P35908 639 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 IQCB1Q15051 598 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 ZNF772Q68DY9 489 aaPredicted RBP17.25■□□□□ 0.35
COL25A1-203ENST00000399132 PIK3AP1Q6ZUJ8 805 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 HOMER1Q86YM7 354 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 FOXP1Q9H334 677 aaPredicted RBP17.25■□□□□ 0.35
COL25A1-203ENST00000399132 DAGLAQ9Y4D2 1042 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
COL25A1-203ENST00000399132 RASA1P20936 1047 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 CDK8P49336 464 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 RHBDL3P58872 404 aa17.25■□□□□ 0.35
COL25A1-203ENST00000399132 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
COL25A1-203ENST00000399132 ANO10Q9NW15 660 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms