RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 FAM196AQ6ZSG2 479 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 FOXP4Q8IVH2 680 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-205ENST00000395757 CARD6Q9BX69 1037 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 RFX7Q2KHR2 1363 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 TCRBV5S4A2TA0A5A2 114 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 NEMFO60524 1076 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 STAT6P42226 847 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
SREBF1-205ENST00000395757 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 SPTLC3Q9NUV7 552 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 FMR1Q06787 632 aaKnown RBP eCLIP16.39■□□□□ 0.21
SREBF1-205ENST00000395757 ARHGAP29Q52LW3 1261 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 CNBD1Q8NA66 436 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 DACH1Q9UI36 760 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 PAXBP1Q9Y5B6 917 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 AFDNP55196 1824 aaKnown RBP16.39■□□□□ 0.21
SREBF1-205ENST00000395757 LIFRP42702 1097 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 CLEC10AQ8IUN9 316 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 GPCPD1Q9NPB8 672 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 KCNG1Q9UIX4 513 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 NAPAP54920 295 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 STAG2Q8N3U4 1231 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 TRERF1Q96PN7 1200 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 BAG1Q99933 345 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-205ENST00000395757 ZNF804BA4D1E1 1349 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 C5P01031 1676 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 TOB1P50616 345 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-205ENST00000395757 NFIXQ14938 502 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 NTRK3Q16288 839 aa16.38■□□□□ 0.21
SREBF1-205ENST00000395757 CCDC94Q9BW85 323 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-205ENST00000395757 IRX2Q9BZI1 471 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-205ENST00000395757 SLU7O95391 586 aaKnown RBP16.37■□□□□ 0.21
SREBF1-205ENST00000395757 FGFR2P21802 821 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 PPP1R13BQ96KQ4 1090 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-205ENST00000395757 LMO7Q8WWI1 1683 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 RAD51AP2Q09MP3 1159 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 KIF4BQ2VIQ3 1234 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 TRAPPC3LQ5T215 181 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 CTR9Q6PD62 1173 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 SCNN1DP51172 638 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 CCZ1BP86790 482 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 CCZ1P86791 482 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-205ENST00000395757 TEX11Q8IYF3 940 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 IGSF22Q8N9C0 903 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 CDK5RAP3Q96JB5 506 aa16.37■□□□□ 0.21
SREBF1-205ENST00000395757 TMX4Q9H1E5 349 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-205ENST00000395757 TEX33O43247 280 aa16.36■□□□□ 0.21
SREBF1-205ENST00000395757 CASQ1P31415 396 aa16.36■□□□□ 0.21
SREBF1-205ENST00000395757 NCBP1Q09161 790 aaKnown RBP16.36■□□□□ 0.21
SREBF1-205ENST00000395757 MTF1Q14872 753 aa16.36■□□□□ 0.21
SREBF1-205ENST00000395757 TANGO6Q9C0B7 1094 aa16.36■□□□□ 0.21
SREBF1-205ENST00000395757 RTL9Q8NET4 1388 aa16.36■□□□□ 0.21
SREBF1-205ENST00000395757 WNT7AO00755 349 aa16.36■□□□□ 0.21
SREBF1-205ENST00000395757 NAP1L1P55209 391 aaKnown RBP16.36■□□□□ 0.21
SREBF1-205ENST00000395757 RBM6P78332 1123 aaKnown RBP16.36■□□□□ 0.21
SREBF1-205ENST00000395757 SH3RF3Q8TEJ3 882 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-205ENST00000395757 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-205ENST00000395757 NOC3LQ8WTT2 800 aaKnown RBP16.36■□□□□ 0.21
SREBF1-205ENST00000395757 STAG1Q8WVM7 1258 aa16.36■□□□□ 0.21
SREBF1-205ENST00000395757 KIF5BP33176 963 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 RESP18Q5W5W9 173 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 USP17L2Q6R6M4 530 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 USP21Q9UK80 565 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 TERF1P54274 439 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 TCP10Q12799 353 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 UBE4AQ14139 1066 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 RBM43Q6ZSC3 357 aaKnown RBP16.35■□□□□ 0.21
SREBF1-205ENST00000395757 LRRC47Q8N1G4 583 aaKnown RBP16.35■□□□□ 0.21
SREBF1-205ENST00000395757 DRC1Q96MC2 740 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 DCP1AQ9NPI6 582 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-205ENST00000395757 BAG3O95817 575 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 PTPAQ15257 358 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 DOK7Q18PE1 504 aa16.35■□□□□ 0.21
SREBF1-205ENST00000395757 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
SREBF1-205ENST00000395757 GTF2IP78347 998 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 E4F1Q66K89 784 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-205ENST00000395757 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 SGMS1Q86VZ5 419 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
SREBF1-205ENST00000395757 PPP6R2O75170 966 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 SLURP2P0DP57 97 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 LRRN4CLQ8ND94 238 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.218e-7■■■□□ 15.4
SREBF1-205ENST00000395757 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 MAGEC2Q9UBF1 373 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-205ENST00000395757 BIN2Q9UBW5 565 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-205ENST00000395757 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
SREBF1-205ENST00000395757 ABCC12Q96J65 1359 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 SYNRGQ9UMZ2 1314 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 BCL9O00512 1426 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 TNNI2P48788 182 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
SREBF1-205ENST00000395757 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
SREBF1-205ENST00000395757 TXKP42681 527 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms