RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 RXRBP28702 533 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 CASP1P29466 404 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 PTPN12Q05209 780 aaKnown RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 NELFBQ8WX92 580 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 TRIM31Q9BZY9 425 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 SYNRGQ9UMZ2 1314 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 KRT19P08727 400 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 CNGA1P29973 690 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 NF2P35240 595 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 CYP2J2P51589 502 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 CABP7Q86V35 215 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 DESI2Q9BSY9 194 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 NRBP1Q9UHY1 535 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 USTQ9Y2C2 406 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 WDR17Q8IZU2 1322 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 EIF3JO75822 258 aaKnown RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 MCAMP43121 646 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 TRMT2AQ8IZ69 625 aaKnown RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 SH3RF3Q8TEJ3 882 aaPredicted RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 GTPBP4Q9BZE4 634 aaKnown RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 NLRC4Q9NPP4 1024 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 MAST3O60307 1309 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 GSDMDP57764 484 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 MECOMQ03112 1051 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 POSTNQ15063 836 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 AOC3Q16853 763 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 SLC44A5Q8NCS7 719 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 A0A0G2JLW4 131 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 RRP9O43818 475 aaKnown RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 HOXA13P31271 388 aaPredicted RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 ADCY7P51828 1080 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 CETN1Q12798 172 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 FAM102BQ5T8I3 360 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 IQCEQ6IPM2 695 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 PNMA1Q8ND90 353 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 SLC39A2Q9NP94 309 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 RIMBP3CA6NJZ7 1639 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 RIMBP3BA6NNM3 1639 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 RIMBP3Q9UFD9 1639 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 NOP56O00567 594 aaKnown RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 PDIA3P30101 505 aaKnown RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 NCAPG2Q86XI2 1143 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 IGSF22Q8N9C0 903 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 RNF169Q8NCN4 708 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 CCDC114Q96M63 670 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 MYO1AQ9UBC5 1043 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 MAP2K1Q02750 393 aaPredicted RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 IFRD2Q12894 506 aaPredicted RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 TMEM87BQ96K49 555 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 FAM207AQ9NSI2 230 aaPredicted RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 PCCAP05165 728 aaPredicted RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 ANO3Q9BYT9 981 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 PIK3C2BO00750 1634 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 RIMS1Q86UR5 1692 aaKnown RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 KIAA0754O94854 1291 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 IGKV5-2P06315 115 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 ALDH1B1P30837 517 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 FANCCQ00597 558 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 PLCB3Q01970 1234 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 FAM160A1Q05DH4 1040 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 BRAPQ7Z569 592 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 KLRF2D3W0D1 207 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 LRRC41Q15345 812 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 HERC4Q5GLZ8 1057 aaPredicted RBP10.23□□□□□ -0.77
CDH11-202ENST00000394156 JAKMIP2Q96AA8 810 aa10.23□□□□□ -0.77
CDH11-202ENST00000394156 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 PFKFB1P16118 471 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 PDE6BP35913 854 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 ARHGEF16Q5VV41 709 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 CSGALNACT2Q8N6G5 542 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 HEG1Q9ULI3 1381 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 PPP2R5DQ14738 602 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 IQUBQ8NA54 791 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 AFF2P51816 1311 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 MROH2AA6NES4 1674 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 TMEM232C9JQI7 657 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 GAS2L3Q86XJ1 694 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 ZNF668Q96K58 619 aaPredicted RBP10.22□□□□□ -0.77
CDH11-202ENST00000394156 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDH11-202ENST00000394156 NPC1L1Q9UHC9 1359 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 CHRNA5P30532 468 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 RASGRF1Q13972 1273 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 SESTD1Q86VW0 696 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 CSRNP1Q96S65 589 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 PALLDQ8WX93 1383 aa10.22□□□□□ -0.77
CDH11-202ENST00000394156 BAG1Q99933 345 aaPredicted RBP10.22□□□□□ -0.77
CDH11-202ENST00000394156 TBC1D8BQ0IIM8 1120 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 INTS4Q96HW7 963 aaKnown RBP10.21□□□□□ -0.77
CDH11-202ENST00000394156 CCDC42Q96M95 316 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 CTAGE9A4FU28 777 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 PLEKHA8P1O95397 391 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 TYW1BQ6NUM6 668 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 SEPT14Q6ZU15 432 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 OTUD6BQ8N6M0 293 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 SMCR8Q8TEV9 937 aaPredicted RBP10.21□□□□□ -0.77
CDH11-202ENST00000394156 CELF1Q92879 486 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms