RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 PRMT6Q96LA8 375 aaPredicted RBP12.71□□□□□ -0.37
FAM239A-201ENST00000381108 SERPINB13Q9UIV8 391 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 MYH6P13533 1939 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 FMNL1O95466 1100 aaPredicted RBP12.71□□□□□ -0.37
FAM239A-201ENST00000381108 HLA-DOAP06340 250 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 VIL1P09327 827 aaKnown RBP12.71□□□□□ -0.37
FAM239A-201ENST00000381108 RCAN1P53805 252 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
FAM239A-201ENST00000381108 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 MRIQ9BWK5 157 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
FAM239A-201ENST00000381108 FAM198AQ9UFP1 575 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 MYO3BQ8WXR4 1341 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 FAM196BA6NMK8 535 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 DDAH1O94760 285 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CXCL9Q07325 125 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 NBPF11Q86T75 865 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 OGFOD1Q8N543 542 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
FAM239A-201ENST00000381108 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
FAM239A-201ENST00000381108 BAZ2BQ9UIF8 2168 aaKnown RBP12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CLRN2A0PK11 232 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CALM1P0DP23 149 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CALM2P0DP24 149 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CALM3P0DP25 149 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 GABPAQ06546 454 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
FAM239A-201ENST00000381108 CEP95Q96GE4 821 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
FAM239A-201ENST00000381108 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
FAM239A-201ENST00000381108 STK36Q9NRP7 1315 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 AKR1B1P15121 316 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
FAM239A-201ENST00000381108 TRIM29Q14134 588 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 KRT40Q6A162 431 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 RASGRP2Q7LDG7 609 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 CLEC10AQ8IUN9 316 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 RBM28Q9NW13 759 aaKnown RBP12.69□□□□□ -0.38
FAM239A-201ENST00000381108 HDAC9Q9UKV0 1011 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 SPATA32Q96LK8 384 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 GMLQ99445 158 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 TMEM47Q9BQJ4 181 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 IDI2Q9BXS1 227 aa12.69□□□□□ -0.38
FAM239A-201ENST00000381108 TCP10L2B9ZVM9 353 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
FAM239A-201ENST00000381108 DEXIO95424 95 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 SHMT1P34896 483 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 NT5C2P49902 561 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
FAM239A-201ENST00000381108 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
FAM239A-201ENST00000381108 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 CIAPIN1Q6FI81 312 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 TCP11L1Q9NUJ3 509 aa12.68□□□□□ -0.38
FAM239A-201ENST00000381108 SHTN1A0MZ66 631 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 MBD3O95983 291 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 SRBD1Q8N5C6 995 aaKnown RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 WASF1Q92558 559 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 ANP32BQ92688 251 aaKnown RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 KCNJ14Q9UNX9 436 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 UBE2HP62256 183 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 KIF23Q02241 960 aaPredicted RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 FUT2Q10981 343 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 USP28Q96RU2 1077 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 RNF26Q9BY78 433 aaPredicted RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
FAM239A-201ENST00000381108 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 ARFGEF1Q9Y6D6 1849 aa12.67□□□□□ -0.38
FAM239A-201ENST00000381108 CNTNAP5Q8WYK1 1306 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 KIF5BP33176 963 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms