RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ENO4A6NNW6 628 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 KRT7P08729 469 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 ABCD1P33897 745 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 PRPHP41219 470 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 IFT88Q13099 833 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 SPATA17Q96L03 361 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 AFG3L2Q9Y4W6 797 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 SNUPNO95149 360 aaKnown RBP11.91□□□□□ -0.5
CLCN4-202ENST00000380833 KLHL14Q9P2G3 628 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 IRS4O14654 1257 aaPredicted RBP11.91□□□□□ -0.5
CLCN4-202ENST00000380833 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 MAP3K7O43318 606 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 LAMB3Q13751 1172 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 CWF19L2Q2TBE0 894 aaKnown RBP11.91□□□□□ -0.5
CLCN4-202ENST00000380833 TPTE2Q6XPS3 522 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 USTQ9Y2C2 406 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 SYF2O95926 243 aaKnown RBP11.91□□□□□ -0.5
CLCN4-202ENST00000380833 MTMR3Q13615 1198 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 BSPRYQ5W0U4 402 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 GUCA1BQ9UMX6 200 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 MAPK8IP1Q9UQF2 711 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 CUL4BQ13620 913 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 LETM2Q2VYF4 491 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 USP33Q8TEY7 942 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 MCF2LO15068 1137 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 C8orf74Q6P047 294 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 USP37Q86T82 979 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 METTL13Q8N6R0 699 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 TCP11Q8WWU5 503 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 ATP6V0A2Q9Y487 856 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 DENND4BO75064 1496 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 ZRANB2O95218 330 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 CCDC15Q0P6D6 951 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 SEPT2Q15019 361 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 OLFML1Q6UWY5 402 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 ARL10Q8N8L6 244 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 GNL1P36915 607 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 FOXD4Q12950 439 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 FLOT2Q14254 428 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 INAQ16352 499 aa11.9□□□□□ -0.5
CLCN4-202ENST00000380833 TEX13AQ9BXU3 409 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 RBM17Q96I25 401 aaKnown RBP11.9□□□□□ -0.5
CLCN4-202ENST00000380833 EVI5O60447 810 aa11.9□□□□□ -0.51
CLCN4-202ENST00000380833 INPP1P49441 399 aa11.9□□□□□ -0.51
CLCN4-202ENST00000380833 HELLSQ9NRZ9 838 aa11.9□□□□□ -0.51
CLCN4-202ENST00000380833 APOBRQ0VD83 1088 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 MYLK4Q86YV6 388 aaPredicted RBP11.89□□□□□ -0.51
CLCN4-202ENST00000380833 OLFM3Q96PB7 478 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 GIMAP4Q9NUV9 329 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 ZNF174Q15697 407 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 ZNF653Q96CK0 615 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 POLE3Q9NRF9 147 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 TAF5LO75529 589 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 PAK2Q13177 524 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 KANK3Q6NY19 840 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 NSMFQ6X4W1 530 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 LMBR1Q8WVP7 490 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 COQ7Q99807 217 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 CAND2O75155 1236 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 CCDC26Q8TAB7 109 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 KRT23Q9C075 422 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
CLCN4-202ENST00000380833 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
CLCN4-202ENST00000380833 DIABLOQ9NR28 239 aa11.89□□□□□ -0.51
CLCN4-202ENST00000380833 ZNF215Q9UL58 517 aaPredicted RBP11.89□□□□□ -0.51
CLCN4-202ENST00000380833 GADL1Q6ZQY3 521 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 CNBD1Q8NA66 436 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 ITGB1BP2Q9UKP3 347 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
CLCN4-202ENST00000380833 ZBTB24O43167 697 aaPredicted RBP11.88□□□□□ -0.51
CLCN4-202ENST00000380833 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 CASP10Q92851 521 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 MRPL46Q9H2W6 279 aaKnown RBP11.88□□□□□ -0.51
CLCN4-202ENST00000380833 ABCF3Q9NUQ8 709 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 UBXN1Q04323 297 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 SND1Q7KZF4 910 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLCN4-202ENST00000380833 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
CLCN4-202ENST00000380833 IMPACTQ9P2X3 320 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 PRDM1O75626 825 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 CALCOCO2Q13137 446 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
CLCN4-202ENST00000380833 ADGRF5Q8IZF2 1346 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 CUX1P39880 1505 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 SYNJ2BP-COX16A0A087WUM0 186 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 ZNF189O75820 626 aaPredicted RBP11.88□□□□□ -0.51
CLCN4-202ENST00000380833 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 CCDC197Q8NCU1 140 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 NYXQ9GZU5 481 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 COX16Q9P0S2 106 aa11.88□□□□□ -0.51
CLCN4-202ENST00000380833 HSPA1LP34931 641 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms