RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CYP21A2P08686 494 aa22.21■■□□□ 1.15
SSU72-203ENST00000378725 NT5C2P49902 561 aa22.21■■□□□ 1.15
SSU72-203ENST00000378725 TFAP4Q01664 338 aa22.21■■□□□ 1.15
SSU72-203ENST00000378725 FASTKD5Q7L8L6 764 aaKnown RBP22.21■■□□□ 1.15
SSU72-203ENST00000378725 ATAD5Q96QE3 1844 aa22.21■■□□□ 1.15
SSU72-203ENST00000378725 IGF2BP3O00425 579 aaKnown RBP eCLIP22.2■■□□□ 1.14
SSU72-203ENST00000378725 NECTIN1Q15223 517 aa22.2■■□□□ 1.14
SSU72-203ENST00000378725 FAM47AQ5JRC9 791 aa22.2■■□□□ 1.14
SSU72-203ENST00000378725 ACER1Q8TDN7 264 aa22.2■■□□□ 1.14
SSU72-203ENST00000378725 KIAA1683Q9H0B3 1180 aa22.2■■□□□ 1.14
SSU72-203ENST00000378725 PLIN4Q96Q06 1357 aa22.2■■□□□ 1.14
SSU72-203ENST00000378725 A0A1W2PRG0 241 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 TSPY3P0CV98 308 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 TSPY8P0CW00 308 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 ICA1Q05084 483 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 MTMR2Q13614 643 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 OTUD7BQ6GQQ9 843 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 GPAT2Q6NUI2 795 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 PROCA1Q8NCQ7 364 aaPredicted RBP22.19■■□□□ 1.14
SSU72-203ENST00000378725 ZCCHC17Q9NP64 241 aaKnown RBP22.19■■□□□ 1.14
SSU72-203ENST00000378725 RNF186Q9NXI6 227 aa22.19■■□□□ 1.14
SSU72-203ENST00000378725 TSPY2A6NKD2 308 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 BTBD19C9JJ37 291 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 RANBP6O60518 1105 aaKnown RBP22.18■■□□□ 1.14
SSU72-203ENST00000378725 ALDH1A1P00352 501 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 EEF2P13639 858 aaKnown RBP22.18■■□□□ 1.14
SSU72-203ENST00000378725 HMGCS2P54868 508 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 USP17L2Q6R6M4 530 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 ANKRD23Q86SG2 305 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 FAM43AQ8N2R8 423 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 TCP11L1Q9NUJ3 509 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 MTMR4Q9NYA4 1195 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 NYAP2Q9P242 653 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 TMX2Q9Y320 296 aa22.18■■□□□ 1.14
SSU72-203ENST00000378725 CEP350Q5VT06 3117 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 NEDD4P46934 1319 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 CA12O43570 354 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 REC8O95072 547 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 NOVP48745 357 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 USP14P54578 494 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 RRP12Q5JTH9 1297 aaKnown RBP22.17■■□□□ 1.14
SSU72-203ENST00000378725 CLEC10AQ8IUN9 316 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 NKX2-3Q8TAU0 364 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 ESR2Q92731 530 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 MKL1Q969V6 931 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 CEP95Q96GE4 821 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 C12orf42Q96LP6 360 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 CFHR5Q9BXR6 569 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 ARHGEF10LQ9HCE6 1279 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 IL17RBQ9NRM6 502 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 TOMM22Q9NS69 142 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 EMILIN3Q9NT22 766 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 SAGE1Q9NXZ1 904 aa22.17■■□□□ 1.14
SSU72-203ENST00000378725 EPB41L2O43491 1005 aaKnown RBP22.16■■□□□ 1.14
SSU72-203ENST00000378725 BEGAINQ9BUH8 593 aa22.16■■□□□ 1.14
SSU72-203ENST00000378725 KRT23Q9C075 422 aa22.16■■□□□ 1.14
SSU72-203ENST00000378725 CNNM2Q9H8M5 875 aa22.16■■□□□ 1.14
SSU72-203ENST00000378725 TMOD4Q9NZQ9 345 aa22.16■■□□□ 1.14
SSU72-203ENST00000378725 SLC45A1Q9Y2W3 748 aa22.16■■□□□ 1.14
SSU72-203ENST00000378725 TAF6LQ9Y6J9 622 aa22.16■■□□□ 1.14
SSU72-203ENST00000378725 GREB1LQ9C091 1923 aaPredicted RBP22.16■■□□□ 1.14
SSU72-203ENST00000378725 SLC27A2O14975 620 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 DGKZQ13574 1117 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 PPP4R3BQ5MIZ7 849 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 CREB3L3Q68CJ9 461 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 GADL1Q6ZQY3 521 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 FEZ1Q99689 392 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 AGTPBP1Q9UPW5 1226 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 LAMA4Q16363 1823 aa22.15■■□□□ 1.14
SSU72-203ENST00000378725 E7EWF7 191 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 TRPA1O75762 1119 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 TTLL1O95922 423 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 SH2D4AQ9H788 454 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 ZSWIM5Q9P217 1185 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 CLIP2Q9UDT6 1046 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 SYNPO2Q9UMS6 1093 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 MYH8P13535 1937 aa22.14■■□□□ 1.13
SSU72-203ENST00000378725 B4E1Z4 1266 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 PDHXO00330 501 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 KDM4AO75164 1064 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 HSPA1AP0DMV8 641 aaKnown RBP22.13■■□□□ 1.13
SSU72-203ENST00000378725 HSPA1BP0DMV9 641 aaKnown RBP22.13■■□□□ 1.13
SSU72-203ENST00000378725 HOXA7P31268 230 aaPredicted RBP22.13■■□□□ 1.13
SSU72-203ENST00000378725 TSGA10IPQ3SY00 556 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 TREML2Q5T2D2 321 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 STOX1Q6ZVD7 989 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 KCNB2Q92953 911 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 VCPKMTQ9H867 229 aa22.13■■□□□ 1.13
SSU72-203ENST00000378725 NMT2O60551 498 aa22.12■■□□□ 1.13
SSU72-203ENST00000378725 ATP2B2Q01814 1243 aa22.12■■□□□ 1.13
SSU72-203ENST00000378725 ZYXQ15942 572 aaKnown RBP22.12■■□□□ 1.13
SSU72-203ENST00000378725 RNF20Q5VTR2 975 aa22.12■■□□□ 1.13
SSU72-203ENST00000378725 TTC14Q96N46 770 aa22.12■■□□□ 1.13
SSU72-203ENST00000378725 USP26Q9BXU7 913 aa22.12■■□□□ 1.13
SSU72-203ENST00000378725 HSPA4P34932 840 aa22.11■■□□□ 1.13
SSU72-203ENST00000378725 TRDNQ13061 729 aa22.11■■□□□ 1.13
SSU72-203ENST00000378725 PABPC4Q13310 644 aaKnown RBP eCLIP22.11■■□□□ 1.135e-7■□□□□ 9.3
SSU72-203ENST00000378725 KIAA1755Q5JYT7 1200 aa22.11■■□□□ 1.13
SSU72-203ENST00000378725 NCOA7Q8NI08 942 aa22.11■■□□□ 1.13
SSU72-203ENST00000378725 LPAR1Q92633 364 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms