RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 MRE11P49959 708 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 CACNB3P54284 484 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 NFIAQ12857 509 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 SAFBQ15424 915 aaKnown RBP eCLIP17.34■□□□□ 0.37
NEK2-201ENST00000366998 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 BICD2Q8TD16 824 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 GRPEL1Q9HAV7 217 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 KCNJ14Q9UNX9 436 aa17.34■□□□□ 0.37
NEK2-201ENST00000366998 BRCA1P38398 1863 aaKnown RBP17.34■□□□□ 0.37
NEK2-201ENST00000366998 CNTNAP5Q8WYK1 1306 aa17.33■□□□□ 0.37
NEK2-201ENST00000366998 hCG_1642624A0A1W2PR95 340 aa17.33■□□□□ 0.37
NEK2-201ENST00000366998 PRPF3O43395 683 aaKnown RBP17.33■□□□□ 0.37
NEK2-201ENST00000366998 RAD17O75943 681 aa17.33■□□□□ 0.37
NEK2-201ENST00000366998 FUT2Q10981 343 aa17.33■□□□□ 0.37
NEK2-201ENST00000366998 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.37
NEK2-201ENST00000366998 PGBD1Q96JS3 809 aa17.33■□□□□ 0.37
NEK2-201ENST00000366998 MTMR7Q9Y216 660 aa17.33■□□□□ 0.37
NEK2-201ENST00000366998 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.37
NEK2-201ENST00000366998 MMP1P03956 469 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 XBP1P17861 261 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 GABPAQ06546 454 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 TCP10Q12799 353 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 SRBD1Q8N5C6 995 aaKnown RBP17.33■□□□□ 0.36
NEK2-201ENST00000366998 TMEM47Q9BQJ4 181 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 RTEL1Q9NZ71 1219 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 SERPINB13Q9UIV8 391 aa17.33■□□□□ 0.36
NEK2-201ENST00000366998 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.36
NEK2-201ENST00000366998 COL4A5P29400 1685 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 LIG1P18858 919 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 STK38Q15208 465 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 CFAP100Q494V2 611 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 RSBN1LQ6PCB5 846 aaPredicted RBP17.32■□□□□ 0.36
NEK2-201ENST00000366998 NIM1KQ8IY84 436 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 CLIC4Q9Y696 253 aa17.32■□□□□ 0.36
NEK2-201ENST00000366998 PSMD14O00487 310 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 ME1P48163 572 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 GRM4Q14833 912 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 DIS3L2Q8IYB7 885 aaKnown RBP17.31■□□□□ 0.36
NEK2-201ENST00000366998 CEP95Q96GE4 821 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
NEK2-201ENST00000366998 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
NEK2-201ENST00000366998 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
NEK2-201ENST00000366998 U2AF2P26368 475 aaKnown RBP eCLIP17.31■□□□□ 0.36
NEK2-201ENST00000366998 SF3A1Q15459 793 aaKnown RBP17.31■□□□□ 0.36
NEK2-201ENST00000366998 PKN1Q16512 942 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 ZSCAN29Q8IWY8 852 aaPredicted RBP17.31■□□□□ 0.36
NEK2-201ENST00000366998 ZFPM1Q8IX07 1006 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 VPS33BQ9H267 617 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 POLR3EQ9NVU0 708 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 VPS54Q9P1Q0 977 aa17.31■□□□□ 0.36
NEK2-201ENST00000366998 SIPA1L1O43166 1804 aa17.3■□□□□ 0.36
NEK2-201ENST00000366998 BTBD18B2RXH4 712 aa17.3■□□□□ 0.36
NEK2-201ENST00000366998 LETM1O95202 739 aaPredicted RBP17.3■□□□□ 0.36
NEK2-201ENST00000366998 YEATS4O95619 227 aa17.3■□□□□ 0.36
NEK2-201ENST00000366998 ANO1Q5XXA6 986 aa17.3■□□□□ 0.36
NEK2-201ENST00000366998 IDI2Q9BXS1 227 aa17.3■□□□□ 0.36
NEK2-201ENST00000366998 TDRD3Q9H7E2 651 aaKnown RBP17.3■□□□□ 0.36
NEK2-201ENST00000366998 FAM198AQ9UFP1 575 aa17.3■□□□□ 0.36
NEK2-201ENST00000366998 PLIN4Q96Q06 1357 aa17.3■□□□□ 0.36
NEK2-201ENST00000366998 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
NEK2-201ENST00000366998 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
NEK2-201ENST00000366998 TOP1P11387 765 aaKnown RBP17.29■□□□□ 0.36
NEK2-201ENST00000366998 AKR1B1P15121 316 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 GNAQP50148 359 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 NOSTRINQ8IVI9 506 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 ZNRF3Q9ULT6 936 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 SHMT1P34896 483 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
NEK2-201ENST00000366998 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 TRIM34Q9BYJ4 488 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 TAOK3Q9H2K8 898 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 DHX36Q9H2U1 1008 aaKnown RBP17.29■□□□□ 0.36
NEK2-201ENST00000366998 FOXP1Q9H334 677 aaPredicted RBP17.29■□□□□ 0.36
NEK2-201ENST00000366998 DACT1Q9NYF0 836 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
NEK2-201ENST00000366998 MPHOSPH10O00566 681 aaKnown RBP17.28■□□□□ 0.36
NEK2-201ENST00000366998 SPTLC2O15270 562 aa17.28■□□□□ 0.36
NEK2-201ENST00000366998 CCAR1Q8IX12 1150 aaKnown RBP17.28■□□□□ 0.36
NEK2-201ENST00000366998 PRMT6Q96LA8 375 aaPredicted RBP17.28■□□□□ 0.36
NEK2-201ENST00000366998 NUP62CLQ9H1M0 184 aa17.28■□□□□ 0.36
NEK2-201ENST00000366998 EHD4Q9H223 541 aa17.28■□□□□ 0.36
NEK2-201ENST00000366998 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
NEK2-201ENST00000366998 ZBTB12Q9Y330 459 aaPredicted RBP17.28■□□□□ 0.36
NEK2-201ENST00000366998 MYH4Q9Y623 1939 aa17.27■□□□□ 0.36
NEK2-201ENST00000366998 DDTLA6NHG4 134 aaPredicted RBP17.27■□□□□ 0.36
NEK2-201ENST00000366998 SCG2P13521 617 aa17.27■□□□□ 0.36
NEK2-201ENST00000366998 NR5A1Q13285 461 aa17.27■□□□□ 0.36
NEK2-201ENST00000366998 OGFOD1Q8N543 542 aa17.27■□□□□ 0.36
NEK2-201ENST00000366998 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
NEK2-201ENST00000366998 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms