RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 PPFIA4O75335 1185 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 EPB41P11171 864 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 EEF1GP26641 437 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 CDC23Q9UJX2 597 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 KCNJ6P48051 423 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 FRMD4BQ9Y2L6 1034 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 TRAF5O00463 557 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 LAD1O00515 517 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 CACTINQ8WUQ7 758 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 PHKBQ93100 1093 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 ST5P78524 1137 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 KCNJ18B7U540 433 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 KCNJ12Q14500 433 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 STAMBPO95630 424 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 ZNF532Q9HCE3 1301 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 TCP1P17987 556 aaKnown RBP13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 VPS16Q9H269 839 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 NECTIN1Q15223 517 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 PANX2Q96RD6 677 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 RXRAP19793 462 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 ZNF654Q8IZM8 581 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 LACTBP83111 547 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 V9GY48 417 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 FAM13AO94988 1023 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 RAPGEF1Q13905 1077 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 CETN3O15182 167 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 PDE4DQ08499 809 aa13.15□□□□□ -0.3
CDC42BPA-202ENST00000366764 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.31
CDC42BPA-202ENST00000366764 DBNLQ9UJU6 430 aaKnown RBP13.15□□□□□ -0.31
CDC42BPA-202ENST00000366764 GOLGA8KD6RF30 607 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 DDAH1O94760 285 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 MORC3Q14149 939 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 NT5C3AQ9H0P0 336 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 METP08581 1390 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 KIDINS220Q9ULH0 1771 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 TNNI2P48788 182 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 TAOK1Q7L7X3 1001 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 IQCGQ9H095 443 aaKnown RBP13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 PDE6AP16499 860 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 REXO1Q8N1G1 1221 aaKnown RBP13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 GPATCH11Q8N954 259 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 ARHGEF40Q8TER5 1519 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 KIF2CQ99661 725 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 RNF26Q9BY78 433 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
CDC42BPA-202ENST00000366764 FGAP02671 866 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 MCTP2Q6DN12 878 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 SEMA3EO15041 775 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 IGSF3O75054 1194 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 RAB17Q9H0T7 212 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 CALUO43852 315 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 LONP1P36776 959 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 PIK3AP1Q6ZUJ8 805 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 RESTQ13127 1097 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 SFMBT2Q5VUG0 894 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 ARID5AQ03989 594 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 TCIRG1Q13488 830 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 FANCBQ8NB91 859 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 RNF14Q9UBS8 474 aa13.13□□□□□ -0.31
CDC42BPA-202ENST00000366764 RCAN1P53805 252 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms