RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 TRMT1Q9NXH9 659 aaKnown RBP10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 SERTAD1Q9UHV2 236 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 PCDHB6Q9Y5E3 794 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 MORC2Q9Y6X9 1032 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 TPM1P09493 284 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 SBK1Q52WX2 424 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 TTC38Q5R3I4 469 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 METTL16Q86W50 562 aaKnown RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 CCAR2Q8N163 923 aaKnown RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 CICQ96RK0 1608 aaPredicted RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 RREB1Q92766 1687 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 HMGB2P26583 209 aaKnown RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 SPECC1Q5M775 1068 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 TRAPPC3LQ5T215 181 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 ZNF444Q8N0Y2 327 aaPredicted RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 CCDC148Q8NFR7 591 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 RASSF8Q8NHQ8 419 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 RPGRQ92834 1020 aaKnown RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 BCL2L12Q9HB09 334 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 DCP1AQ9NPI6 582 aaPredicted RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 GOLGA6L9A6NEM1 432 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 CCZ1BP86790 482 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 CCZ1P86791 482 aaPredicted RBP10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 DHX58Q96C10 678 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 PHF20Q9BVI0 1012 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 NRAPQ86VF7 1730 aa10.61□□□□□ -0.71
GTF3C2-202ENST00000359541 DDX60Q8IY21 1712 aaKnown RBP10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 SCG2P13521 617 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 CNBD1Q8NA66 436 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 NKX2-3Q8TAU0 364 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 G3V3G9 751 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 FGRP09769 529 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 NCAPHQ15003 741 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 C3orf67Q6ZVT6 689 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 ENOX1Q8TC92 643 aaKnown RBP10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 CSRNP2Q9H175 543 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 SRP68Q9UHB9 627 aaKnown RBP10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 MAN1B1Q9UKM7 699 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 CYP2D7A0A087X1C5 515 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 TOB1P50616 345 aaPredicted RBP10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 IQUBQ8NA54 791 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 CTAGE1Q96RT6 745 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 KCND1Q9NSA2 647 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 CGNQ9P2M7 1197 aaKnown RBP10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 NFE2L3Q9Y4A8 694 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 XDHP47989 1333 aa10.6□□□□□ -0.71
GTF3C2-202ENST00000359541 CHD4Q14839 1912 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 TSPY3P0CV98 308 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 TSPY8P0CW00 308 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 PLCG2P16885 1265 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 TROAPQ12815 778 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 TACC3Q9Y6A5 838 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 CCDC194A0A1B0GVG4 234 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 RAD21O60216 631 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 PLEKHA8P1O95397 391 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 GRAPQ13588 217 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 FCHSD1Q86WN1 690 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 DGKHQ86XP1 1220 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 GRAPLQ8TC17 118 aaPredicted RBP10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 CCDC12Q8WUD4 166 aaPredicted RBP10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 FANCLQ9NW38 375 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 RMND1Q9NWS8 449 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 UBE2Q2LH0YL09 131 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 SLFN14P0C7P3 912 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 PRDX5P30044 214 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 PLCD1P51178 756 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 ST5P78524 1137 aa10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 CCDC47Q96A33 483 aaKnown RBP10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 CCDC94Q9BW85 323 aaPredicted RBP10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 MYO5AQ9Y4I1 1855 aaKnown RBP10.59□□□□□ -0.71
GTF3C2-202ENST00000359541 FAM47AQ5JRC9 791 aa10.58□□□□□ -0.71
GTF3C2-202ENST00000359541 VSTM4Q8IW00 320 aa10.58□□□□□ -0.71
GTF3C2-202ENST00000359541 GSDMAQ96QA5 445 aa10.58□□□□□ -0.71
GTF3C2-202ENST00000359541 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.71
GTF3C2-202ENST00000359541 USP21Q9UK80 565 aa10.58□□□□□ -0.71
GTF3C2-202ENST00000359541 CTIFO43310 598 aaKnown RBP10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 KCNQ4P56696 695 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 ZNF174Q15697 407 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 GALNT17Q6IS24 598 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 PPFIBP1Q86W92 1011 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 SH3GLB2Q9NR46 395 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 PPP1R1BQ9UD71 204 aaPredicted RBP10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 UBAP1LF5GYI3 381 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 ARHGAP6O43182 974 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 ATP1A3P13637 1013 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 AFMP43652 599 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 TFAP4Q01664 338 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 NT5DC1Q5TFE4 455 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 VWA3AA6NCI4 1184 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 MORC3Q14149 939 aa10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
GTF3C2-202ENST00000359541 PIK3AP1Q6ZUJ8 805 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms