RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PDCP20941 246 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 EPS15P42566 896 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 RCAN1P53805 252 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 SEC23AQ15436 765 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 ZNF444Q8N0Y2 327 aaPredicted RBP16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 SWAP70Q9UH65 585 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 HPS5Q9UPZ3 1129 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 MYH4Q9Y623 1939 aa16.19■□□□□ 0.18
PDLIM5-203ENST00000359265 GOLGA8AA7E2F4 631 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 CPLX1O14810 134 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 ENTPD3O75355 529 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 CDK8P49336 464 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 NFIAQ12857 509 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 IFIT1BQ5T764 474 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 CPLX2Q6PUV4 134 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 MICU3Q86XE3 530 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 ENAHQ8N8S7 591 aaPredicted RBP16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 NSUN7Q8NE18 718 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 SMARCC2Q8TAQ2 1214 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 PRMT6Q96LA8 375 aaPredicted RBP16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 GBP4Q96PP9 640 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 EHD4Q9H223 541 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 DHX36Q9H2U1 1008 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 TDRD3Q9H7E2 651 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
PDLIM5-203ENST00000359265 PTPDC1A2A3K4 754 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 TSPY3P0CV98 308 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 TSPY8P0CW00 308 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 RASA1P20936 1047 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 FXR1P51114 621 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 TFAP4Q01664 338 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 FAM47AQ5JRC9 791 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 ZBED3Q96IU2 234 aaPredicted RBP16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 SERPINB13Q9UIV8 391 aa16.17■□□□□ 0.18
PDLIM5-203ENST00000359265 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 TCHHQ07283 1943 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 WNT10BO00744 389 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 STX6O43752 255 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 JAK2O60674 1132 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 CDKL5O76039 1030 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 BRD1O95696 1058 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 SYT1P21579 422 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 CACNB3P54284 484 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 GABPAQ06546 454 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 TNFAIP1Q13829 316 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 PKP1Q13835 747 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 RAB11FIP4Q86YS3 637 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 FAM184AQ8NB25 1140 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 ZNF70Q9UC06 446 aaPredicted RBP16.16■□□□□ 0.18
PDLIM5-203ENST00000359265 CCDC196A0A1B0GTZ2 297 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 DDAH1O94760 285 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 CELF2O95319 508 aaKnown RBP16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 CTDNEP1O95476 244 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 CALM1P0DP23 149 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 CALM2P0DP24 149 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 CALM3P0DP25 149 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 TNNI2P48788 182 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 TCP10Q12799 353 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 NFKBIBQ15653 356 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 RTN1Q16799 776 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 CATIPQ7Z7H3 387 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 ZSCAN29Q8IWY8 852 aaPredicted RBP16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 HHIPL1Q96JK4 782 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
PDLIM5-203ENST00000359265 SHTN1A0MZ66 631 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 DLL1O00548 723 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 PPP2R5BQ15173 497 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 RBM26Q5T8P6 1007 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 LARP1BQ659C4 914 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 FAM83AQ86UY5 434 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 DGKHQ86XP1 1220 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 CRACR2BQ8N4Y2 399 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 DDX11Q96FC9 970 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 MYL10Q9BUA6 226 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 VEZTQ9HBM0 779 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 PI4KBQ9UBF8 816 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 ZDHHC9Q9Y397 364 aa16.14■□□□□ 0.17
PDLIM5-203ENST00000359265 ATAD5Q96QE3 1844 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 CLRN2A0PK11 232 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 NMT2O60551 498 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 ZSCAN22P10073 491 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 RXRAP19793 462 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 NBPF9Q3BBW0 867 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms