RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 HDXQ7Z353 690 aa16.39■□□□□ 0.21
SLC6A20-202ENST00000358525 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
SLC6A20-202ENST00000358525 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
SLC6A20-202ENST00000358525 TDRD7Q8NHU6 1098 aaKnown RBP16.39■□□□□ 0.21
SLC6A20-202ENST00000358525 TBC1D7Q9P0N9 293 aa16.39■□□□□ 0.21
SLC6A20-202ENST00000358525 SLFNL1Q499Z3 407 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 ATG3Q9NT62 314 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 SMCO2A6NFE2 343 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 WDHD1O75717 1129 aaPredicted RBP16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 CAMSAP1Q5T5Y3 1602 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 NEBLO76041 1014 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 REXO1Q8N1G1 1221 aaKnown RBP16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 CYP27B1O15528 508 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 IL6STP40189 918 aaPredicted RBP16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 SLC1A4P43007 532 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 TCP10Q12799 353 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 SLC39A14Q15043 492 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
SLC6A20-202ENST00000358525 RAD51AP2Q09MP3 1159 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 NCAPH2Q6IBW4 605 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 PRPHP41219 470 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 HAUS3Q68CZ6 603 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 PRKAB2O43741 272 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 EPB41P11171 864 aaKnown RBP16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 RESTQ13127 1097 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 DESI2Q9BSY9 194 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 SCG2P13521 617 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 DNAJC21Q5F1R6 531 aaKnown RBP16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 NUP58Q9BVL2 599 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 RASAL2Q9UJF2 1139 aa16.37■□□□□ 0.21
SLC6A20-202ENST00000358525 H7C1W4 665 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 VAV2P52735 878 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 INF2Q27J81 1249 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 POLR3EQ9NVU0 708 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 ARHGEF40Q8TER5 1519 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 TUBBP07437 444 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 GJC1P36383 396 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 KIF2CQ99661 725 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 SP4Q02446 784 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 GTF2IP78347 998 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 USH1GQ495M9 461 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 NELFCDQ8IXH7 590 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 CCDC155Q8N6L0 562 aa16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 SYMPKQ92797 1274 aaKnown RBP16.36■□□□□ 0.21
SLC6A20-202ENST00000358525 PTPRMP28827 1452 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 IVLP07476 585 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 CCDC91Q7Z6B0 441 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 FRMD4BQ9Y2L6 1034 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 FMNL1O95466 1100 aaPredicted RBP16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 EZRP15311 586 aaKnown RBP16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 PIGBQ92521 554 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 PCDHA5Q9Y5H7 936 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 DDAH1O94760 285 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 KCNJ18B7U540 433 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 CETN3O15182 167 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 RNASE9P60153 205 aaKnown RBP16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 MORC3Q14149 939 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 KCNJ12Q14500 433 aa16.35■□□□□ 0.21
SLC6A20-202ENST00000358525 ATP2C2O75185 946 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 DYNLL1P63167 89 aaKnown RBP16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 PTGDRQ13258 359 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 FRMPD2Q68DX3 1309 aaPredicted RBP16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 TNNC1P63316 161 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 TUBB2AQ13885 445 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 TUBB2BQ9BVA1 445 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 DNAI2Q9GZS0 605 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 PIH1D3Q9NQM4 214 aaKnown RBP16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 SH2B2O14492 632 aaPredicted RBP16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 PPP6R2O75170 966 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 TCHPQ9BT92 498 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 TECP42680 631 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 GLT8D2Q9H1C3 349 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms