RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SCRN1Q12765 414 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 CTR9Q6PD62 1173 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 KRT222Q8N1A0 295 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 NSUN7Q8NE18 718 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 SUGT1Q9Y2Z0 365 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 H3BQV1 296 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 PRDM1O75626 825 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 GSDMDP57764 484 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 PPARAQ07869 468 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 IFFO2Q5TF58 517 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 CIAPIN1Q6FI81 312 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 USP40Q9NVE5 1235 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 IMPACTQ9P2X3 320 aa14.6□□□□□ -0.07
RTFDC1-202ENST00000357348 NEDD4P46934 1319 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 B4E1Z4 1266 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 VIL1P09327 827 aaKnown RBP14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 PPP4CP60510 307 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 FGD1P98174 961 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 FAM160A1Q05DH4 1040 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 TERF2Q15554 542 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 ALX1Q15699 326 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 APOBEC3HQ6NTF7 200 aaKnown RBP14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 DDX11Q96FC9 970 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 FAM163AQ96GL9 167 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 VPS33BQ9H267 617 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 L2HGDHQ9H9P8 463 aa14.59□□□□□ -0.07
RTFDC1-202ENST00000357348 CTDNEP1O95476 244 aa14.58□□□□□ -0.07
RTFDC1-202ENST00000357348 CFAP100Q494V2 611 aa14.58□□□□□ -0.07
RTFDC1-202ENST00000357348 CDC42EP5Q6NZY7 148 aa14.58□□□□□ -0.07
RTFDC1-202ENST00000357348 CREBRFQ8IUR6 639 aa14.58□□□□□ -0.07
RTFDC1-202ENST00000357348 BPIFA3Q9BQP9 254 aa14.58□□□□□ -0.07
RTFDC1-202ENST00000357348 MYH1P12882 1939 aa14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 SBF1O95248 1867 aa14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 NAV1Q8NEY1 1877 aa14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 SLU7O95391 586 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 HMGB1P09429 215 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 FKBP1AP62942 108 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 HHIPL2Q6UWX4 724 aa14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 NBPF11Q86T75 865 aa14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 ZNF396Q96N95 335 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 TDRD3Q9H7E2 651 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 GPHNQ9NQX3 736 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 ATP8A2Q9NTI2 1148 aa14.58□□□□□ -0.08
RTFDC1-202ENST00000357348 BECN2A8MW95 431 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 TUBB4AP04350 444 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 TCP10Q12799 353 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 NFIAQ12857 509 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 TRDNQ13061 729 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 CCDC73Q6ZRK6 1079 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 MFSD6Q6ZSS7 791 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 OGFOD1Q8N543 542 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 NCOA7Q8NI08 942 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 DYNLL2Q96FJ2 89 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 PRMT6Q96LA8 375 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 USP28Q96RU2 1077 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 DDX4Q9NQI0 724 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 SCAF8Q9UPN6 1271 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 ECM29Q5VYK3 1845 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 FLT1P17948 1338 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 LTBP3Q9NS15 1303 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 SOCS7O14512 581 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 POLR3DP05423 398 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 PLCD1P51178 756 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 EXOSC10Q01780 885 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 DHX8Q14562 1220 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 GPR162Q16538 588 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 FBXO38Q6PIJ6 1188 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 ZNF771Q7L3S4 317 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 CEP57L1Q8IYX8 460 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 ZKSCAN3Q9BRR0 538 aa14.57□□□□□ -0.08
RTFDC1-202ENST00000357348 CLRN2A0PK11 232 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 KINO60870 393 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 IGSF3O75054 1194 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 WDHD1O75717 1129 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 PLCG2P16885 1265 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 EIF6P56537 245 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 CYB5R4Q7L1T6 521 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 DHX32Q7L7V1 743 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 FMR1NBQ8N0W7 255 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 ZNF592Q92610 1267 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 ZDHHC15Q96MV8 337 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 GMLQ99445 158 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 MKRN1Q9UHC7 482 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 NAP1L2Q9ULW6 460 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 ZMYM6O95789 1325 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 A0A1W2PQ27 194 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 A0A1W2PQ64 194 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 SLURP2P0DP57 97 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 H2AFXP16104 143 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 LMNB1P20700 586 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 TMED8Q6PL24 325 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 ZFPM1Q8IX07 1006 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 SERPINA10Q9UK55 444 aa14.56□□□□□ -0.08
RTFDC1-202ENST00000357348 MYO3BQ8WXR4 1341 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms