RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 TSPY8P0CW00 308 aa16.51■□□□□ 0.23
SEC13-202ENST00000350697 BACE1P56817 501 aa16.51■□□□□ 0.23
SEC13-202ENST00000350697 NEDD1Q8NHV4 660 aa16.51■□□□□ 0.23
SEC13-202ENST00000350697 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEC13-202ENST00000350697 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 C19orf81C9J6K1 198 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 REC8O95072 547 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 CYP21A2P08686 494 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 NT5C2P49902 561 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 TFAP4Q01664 338 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 ICA1Q05084 483 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 MTMR2Q13614 643 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 SH3D19Q5HYK7 790 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 RRP12Q5JTH9 1297 aaKnown RBP16.5■□□□□ 0.23
SEC13-202ENST00000350697 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
SEC13-202ENST00000350697 IFNL1Q8IU54 200 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 FEZ1Q99689 392 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 PTPN18Q99952 460 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 BEGAINQ9BUH8 593 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
SEC13-202ENST00000350697 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 IGF2BP3O00425 579 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEC13-202ENST00000350697 HMGCS2P54868 508 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 MOGSQ13724 837 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 CLEC10AQ8IUN9 316 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 PROCA1Q8NCQ7 364 aaPredicted RBP16.49■□□□□ 0.23
SEC13-202ENST00000350697 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 ESR2Q92731 530 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 CNNM2Q9H8M5 875 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 ARHGEF10LQ9HCE6 1279 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 NEDD4P46934 1319 aa16.49■□□□□ 0.23
SEC13-202ENST00000350697 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 USP14P54578 494 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 GADL1Q6ZQY3 521 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 KRT23Q9C075 422 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
SEC13-202ENST00000350697 TMOD4Q9NZQ9 345 aa16.48■□□□□ 0.23
SEC13-202ENST00000350697 BTBD19C9JJ37 291 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 CA12O43570 354 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 EEF2P13639 858 aaKnown RBP16.47■□□□□ 0.23
SEC13-202ENST00000350697 PPP4R3BQ5MIZ7 849 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 ANKRD23Q86SG2 305 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 CEP95Q96GE4 821 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 RNF186Q9NXI6 227 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 MTMR4Q9NYA4 1195 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 LOC285556D6RIA3 1793 aa16.47■□□□□ 0.23
SEC13-202ENST00000350697 A0A1W2PRG0 241 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 SLC27A2O14975 620 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 EPB41L2O43491 1005 aaKnown RBP16.46■□□□□ 0.23
SEC13-202ENST00000350697 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 TRDNQ13061 729 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
SEC13-202ENST00000350697 CREB3L3Q68CJ9 461 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 GPAT2Q6NUI2 795 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
SEC13-202ENST00000350697 B4E1Z4 1266 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 E7EWF7 191 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
SEC13-202ENST00000350697 KDM4AO75164 1064 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 TRPA1O75762 1119 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 TTLL1O95922 423 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 DGKZQ13574 1117 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 IL17RBQ9NRM6 502 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 SLC45A1Q9Y2W3 748 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 PDHXO00330 501 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 HSPA1AP0DMV8 641 aaKnown RBP16.45■□□□□ 0.22
SEC13-202ENST00000350697 HSPA1BP0DMV9 641 aaKnown RBP16.45■□□□□ 0.22
SEC13-202ENST00000350697 PABPC4Q13310 644 aaKnown RBP eCLIP16.45■□□□□ 0.222e-9■□□□□ 8.8
SEC13-202ENST00000350697 TREML2Q5T2D2 321 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
SEC13-202ENST00000350697 NCOA7Q8NI08 942 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 MKL1Q969V6 931 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 SYNPO2Q9UMS6 1093 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 TAF6LQ9Y6J9 622 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
SEC13-202ENST00000350697 NMT2O60551 498 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 ZKSCAN1P17029 563 aaPredicted RBP16.44■□□□□ 0.22
SEC13-202ENST00000350697 TAF1CQ15572 869 aaPredicted RBP16.44■□□□□ 0.22
SEC13-202ENST00000350697 CCDC178Q5BJE1 867 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 NKX2-3Q8TAU0 364 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms