RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 KCNG4Q8TDN1 519 aa29.21■■■□□ 2.27
TRADD-201ENST00000345057 GJB4Q9NTQ9 266 aa29.21■■■□□ 2.27
TRADD-201ENST00000345057 FUT2Q10981 343 aa29.21■■■□□ 2.27
TRADD-201ENST00000345057 CCDC82Q8N4S0 544 aa29.21■■■□□ 2.27
TRADD-201ENST00000345057 BICD2Q8TD16 824 aa29.21■■■□□ 2.27
TRADD-201ENST00000345057 DHX36Q9H2U1 1008 aaKnown RBP29.21■■■□□ 2.27
TRADD-201ENST00000345057 PLIN4Q96Q06 1357 aa29.2■■■□□ 2.27
TRADD-201ENST00000345057 RBM5P52756 815 aaKnown RBP eCLIP29.2■■■□□ 2.26
TRADD-201ENST00000345057 GABPAQ06546 454 aa29.2■■■□□ 2.26
TRADD-201ENST00000345057 DDX19AQ9NUU7 478 aaKnown RBP29.2■■■□□ 2.26
TRADD-201ENST00000345057 SERPINB13Q9UIV8 391 aa29.2■■■□□ 2.26
TRADD-201ENST00000345057 KIF28PB7ZC32 967 aa29.19■■■□□ 2.26
TRADD-201ENST00000345057 ZBTB7AO95365 584 aa29.19■■■□□ 2.26
TRADD-201ENST00000345057 CEBPZQ03701 1054 aaKnown RBP29.19■■■□□ 2.26
TRADD-201ENST00000345057 IDI2Q9BXS1 227 aa29.19■■■□□ 2.26
TRADD-201ENST00000345057 FOXP1Q9H334 677 aaPredicted RBP29.19■■■□□ 2.26
TRADD-201ENST00000345057 DDX4Q9NQI0 724 aaKnown RBP29.19■■■□□ 2.26
TRADD-201ENST00000345057 GUCY1A2P33402 732 aa29.19■■■□□ 2.26
TRADD-201ENST00000345057 NASPP49321 788 aaPredicted RBP29.19■■■□□ 2.26
TRADD-201ENST00000345057 CMTR1Q8N1G2 835 aaKnown RBP29.19■■■□□ 2.26
TRADD-201ENST00000345057 LARGE2Q8N3Y3 721 aa29.19■■■□□ 2.26
TRADD-201ENST00000345057 EHD4Q9H223 541 aa29.19■■■□□ 2.26
TRADD-201ENST00000345057 STX8Q9UNK0 236 aa29.19■■■□□ 2.26
TRADD-201ENST00000345057 PSME4Q14997 1843 aa29.18■■■□□ 2.26
TRADD-201ENST00000345057 PLEKHA8P1O95397 391 aa29.18■■■□□ 2.26
TRADD-201ENST00000345057 PGBD1Q96JS3 809 aa29.18■■■□□ 2.26
TRADD-201ENST00000345057 STK38Q15208 465 aa29.17■■■□□ 2.26
TRADD-201ENST00000345057 PPP4R3BQ5MIZ7 849 aa29.17■■■□□ 2.26
TRADD-201ENST00000345057 LZTS2Q9BRK4 669 aa29.17■■■□□ 2.26
TRADD-201ENST00000345057 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.17■■■□□ 2.26
TRADD-201ENST00000345057 MYH6P13533 1939 aa29.17■■■□□ 2.26
TRADD-201ENST00000345057 XRCC6P12956 609 aaKnown RBP eCLIP29.17■■■□□ 2.26
TRADD-201ENST00000345057 GRM4Q14833 912 aa29.17■■■□□ 2.26
TRADD-201ENST00000345057 SF3A1Q15459 793 aaKnown RBP29.17■■■□□ 2.26
TRADD-201ENST00000345057 TPRNQ4KMQ1 711 aa29.17■■■□□ 2.26
TRADD-201ENST00000345057 CNTNAP5Q8WYK1 1306 aa29.16■■■□□ 2.26
TRADD-201ENST00000345057 ADAMTSL1Q8N6G6 1762 aa29.16■■■□□ 2.26
TRADD-201ENST00000345057 YDJCA8MPS7 323 aa29.16■■■□□ 2.26
TRADD-201ENST00000345057 NOSTRINQ8IVI9 506 aa29.16■■■□□ 2.26
TRADD-201ENST00000345057 LINC00301Q8NCQ3 95 aa29.16■■■□□ 2.26
TRADD-201ENST00000345057 TMEM47Q9BQJ4 181 aa29.16■■■□□ 2.26
TRADD-201ENST00000345057 BRMS1Q9HCU9 246 aa29.16■■■□□ 2.26
TRADD-201ENST00000345057 V9GY48 417 aaPredicted RBP29.16■■■□□ 2.26
TRADD-201ENST00000345057 TOP1P11387 765 aaKnown RBP29.15■■■□□ 2.26
TRADD-201ENST00000345057 ME1P48163 572 aa29.15■■■□□ 2.26
TRADD-201ENST00000345057 NOVP48745 357 aa29.15■■■□□ 2.26
TRADD-201ENST00000345057 DALRD3Q5D0E6 543 aaKnown RBP29.15■■■□□ 2.26
TRADD-201ENST00000345057 ANO1Q5XXA6 986 aa29.15■■■□□ 2.26
TRADD-201ENST00000345057 RSBN1LQ6PCB5 846 aaPredicted RBP29.15■■■□□ 2.26
TRADD-201ENST00000345057 DIS3L2Q8IYB7 885 aaKnown RBP29.15■■■□□ 2.26
TRADD-201ENST00000345057 PKN1Q16512 942 aa29.14■■■□□ 2.26
TRADD-201ENST00000345057 JMYQ8N9B5 988 aa29.14■■■□□ 2.26
TRADD-201ENST00000345057 TSPY26PQ9H489 355 aa29.14■■■□□ 2.26
TRADD-201ENST00000345057 HDAC9Q9UKV0 1011 aa29.14■■■□□ 2.26
TRADD-201ENST00000345057 ATF5Q9Y2D1 282 aaPredicted RBP29.14■■■□□ 2.26
TRADD-201ENST00000345057 SRBD1Q8N5C6 995 aaKnown RBP29.14■■■□□ 2.26
TRADD-201ENST00000345057 FTOQ9C0B1 505 aaKnown RBP eCLIP29.14■■■□□ 2.26
TRADD-201ENST00000345057 NUP62CLQ9H1M0 184 aa29.14■■■□□ 2.26
TRADD-201ENST00000345057 ADALQ6DHV7 355 aa29.13■■■□□ 2.25
TRADD-201ENST00000345057 UBE2Q2LH0YL09 131 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 SPTLC2O15270 562 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 LIG1P18858 919 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 NIM1KQ8IY84 436 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 CCDC17Q96LX7 622 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 CLIC4Q9Y696 253 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 A0A1W2PQ27 194 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 A0A1W2PQ64 194 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 A0A1W2PQD8 194 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 VIL1P09327 827 aaKnown RBP29.12■■■□□ 2.25
TRADD-201ENST00000345057 RILPL1Q5EBL4 403 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 CCDC73Q6ZRK6 1079 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 ZNF277Q9NRM2 450 aaPredicted RBP29.12■■■□□ 2.25
TRADD-201ENST00000345057 KCNJ14Q9UNX9 436 aa29.12■■■□□ 2.25
TRADD-201ENST00000345057 NFIAQ12857 509 aa29.11■■■□□ 2.25
TRADD-201ENST00000345057 CEP95Q96GE4 821 aa29.11■■■□□ 2.25
TRADD-201ENST00000345057 PHF20Q9BVI0 1012 aa29.11■■■□□ 2.25
TRADD-201ENST00000345057 DACT1Q9NYF0 836 aa29.11■■■□□ 2.25
TRADD-201ENST00000345057 PI4KBQ9UBF8 816 aa29.11■■■□□ 2.25
TRADD-201ENST00000345057 MYH8P13535 1937 aa29.11■■■□□ 2.25
TRADD-201ENST00000345057 BTBD18B2RXH4 712 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 ENTPD3O75355 529 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 SCG2P13521 617 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 SLC39A14Q15043 492 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 PFKFB3Q16875 520 aaPredicted RBP29.1■■■□□ 2.25
TRADD-201ENST00000345057 CFAP100Q494V2 611 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 FAM177A1Q8N128 213 aaPredicted RBP29.1■■■□□ 2.25
TRADD-201ENST00000345057 ANP32BQ92688 251 aaKnown RBP29.1■■■□□ 2.25
TRADD-201ENST00000345057 MAD2L2Q9UI95 211 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 ZNRF3Q9ULT6 936 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 KRT2P35908 639 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 CCAR1Q8IX12 1150 aaKnown RBP29.1■■■□□ 2.25
TRADD-201ENST00000345057 OGFOD1Q8N543 542 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 TMOD2Q9NZR1 351 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 CD2APQ9Y5K6 639 aa29.1■■■□□ 2.25
TRADD-201ENST00000345057 COL2A1P02458 1487 aaPredicted RBP29.1■■■□□ 2.25
TRADD-201ENST00000345057 PPP6R2O75170 966 aa29.09■■■□□ 2.25
TRADD-201ENST00000345057 SMARCA1P28370 1054 aa29.09■■■□□ 2.25
TRADD-201ENST00000345057 SH3GLB2Q9NR46 395 aa29.09■■■□□ 2.25
TRADD-201ENST00000345057 MTMR4Q9NYA4 1195 aa29.09■■■□□ 2.25
TRADD-201ENST00000345057 PCDHA7Q9UN72 937 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms