RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 OSBPL5Q9H0X9 879 aaPredicted RBP21.68■■□□□ 1.06
RFTN1-201ENST00000334133 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.68■■□□□ 1.06
RFTN1-201ENST00000334133 V9GYY5 206 aaPredicted RBP21.68■■□□□ 1.06
RFTN1-201ENST00000334133 DUOX1Q9NRD9 1551 aa21.68■■□□□ 1.06
RFTN1-201ENST00000334133 IKBKBO14920 756 aa21.67■■□□□ 1.06
RFTN1-201ENST00000334133 TOM1O60784 492 aa21.67■■□□□ 1.06
RFTN1-201ENST00000334133 SRPRBQ9Y5M8 271 aaKnown RBP21.67■■□□□ 1.06
RFTN1-201ENST00000334133 XBP1P17861 261 aa21.67■■□□□ 1.06
RFTN1-201ENST00000334133 RFC4P35249 363 aa21.67■■□□□ 1.06
RFTN1-201ENST00000334133 GSDMDP57764 484 aa21.67■■□□□ 1.06
RFTN1-201ENST00000334133 RGS22Q8NE09 1264 aa21.67■■□□□ 1.06
RFTN1-201ENST00000334133 LTBP4Q8N2S1 1624 aa21.67■■□□□ 1.06
RFTN1-201ENST00000334133 UBAP1LF5GYI3 381 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 COBLO75128 1261 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 VPS72Q15906 364 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 E4F1Q66K89 784 aaPredicted RBP21.66■■□□□ 1.06
RFTN1-201ENST00000334133 TMTC3Q6ZXV5 915 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 SLC44A5Q8NCS7 719 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 CTCFLQ8NI51 663 aaPredicted RBP21.66■■□□□ 1.06
RFTN1-201ENST00000334133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.66■■□□□ 1.06
RFTN1-201ENST00000334133 A0A1B0GUL6 1792 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 PRPF3O43395 683 aaKnown RBP21.66■■□□□ 1.06
RFTN1-201ENST00000334133 KLHL10Q6JEL2 608 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 CCDC112Q8NEF3 446 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 SMARCE1Q969G3 411 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 ANKRD2Q9GZV1 360 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 VWA3AA6NCI4 1184 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 PIK3AP1Q6ZUJ8 805 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 MTA3Q9BTC8 594 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 USP21Q9UK80 565 aa21.66■■□□□ 1.06
RFTN1-201ENST00000334133 USP5P45974 858 aa21.65■■□□□ 1.06
RFTN1-201ENST00000334133 SMYD4Q8IYR2 804 aaPredicted RBP21.65■■□□□ 1.06
RFTN1-201ENST00000334133 SH3RF3Q8TEJ3 882 aaPredicted RBP21.65■■□□□ 1.06
RFTN1-201ENST00000334133 GPKOWQ92917 476 aaPredicted RBP eCLIP21.65■■□□□ 1.06
RFTN1-201ENST00000334133 SAP30BPQ9UHR5 308 aaKnown RBP21.65■■□□□ 1.06
RFTN1-201ENST00000334133 ACTN4O43707 911 aaKnown RBP21.65■■□□□ 1.06
RFTN1-201ENST00000334133 TFAP4Q01664 338 aa21.65■■□□□ 1.06
RFTN1-201ENST00000334133 NPY5RQ15761 445 aa21.65■■□□□ 1.06
RFTN1-201ENST00000334133 FAM196AQ6ZSG2 479 aa21.65■■□□□ 1.06
RFTN1-201ENST00000334133 SYMPKQ92797 1274 aaKnown RBP21.65■■□□□ 1.06
RFTN1-201ENST00000334133 NFE2L3Q9Y4A8 694 aa21.65■■□□□ 1.06
RFTN1-201ENST00000334133 STX17P56962 302 aa21.64■■□□□ 1.06
RFTN1-201ENST00000334133 RASGRP2Q7LDG7 609 aa21.64■■□□□ 1.06
RFTN1-201ENST00000334133 IMPACTQ9P2X3 320 aa21.64■■□□□ 1.06
RFTN1-201ENST00000334133 CNTNAP5Q8WYK1 1306 aa21.64■■□□□ 1.06
RFTN1-201ENST00000334133 USP17L3A6NCW0 530 aa21.64■■□□□ 1.05
RFTN1-201ENST00000334133 USP17L4A6NCW7 530 aa21.64■■□□□ 1.05
RFTN1-201ENST00000334133 CDK11BP21127 795 aaKnown RBP21.64■■□□□ 1.05
RFTN1-201ENST00000334133 NLRP5P59047 1200 aa21.64■■□□□ 1.05
RFTN1-201ENST00000334133 SCN7AQ01118 1682 aa21.64■■□□□ 1.05
RFTN1-201ENST00000334133 USP17L1Q7RTZ2 530 aa21.64■■□□□ 1.05
RFTN1-201ENST00000334133 RASGRP4Q8TDF6 673 aa21.64■■□□□ 1.05
RFTN1-201ENST00000334133 CEP131Q9UPN4 1083 aa21.64■■□□□ 1.05
RFTN1-201ENST00000334133 CDC25AP30304 524 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 NYAP1Q6ZVC0 841 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 STAG2Q8N3U4 1231 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 MED15Q96RN5 788 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 SAMSN1Q9NSI8 373 aaKnown RBP21.63■■□□□ 1.05
RFTN1-201ENST00000334133 INTS13Q9NVM9 706 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 SEMA3EO15041 775 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 MCM7P33993 719 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 RCAN1P53805 252 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 FGRP09769 529 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 PTGDRQ13258 359 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 RCSD1Q6JBY9 416 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 TGFBRAP1Q8WUH2 860 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 ATP8A2Q9NTI2 1148 aa21.63■■□□□ 1.05
RFTN1-201ENST00000334133 RBM28Q9NW13 759 aaKnown RBP21.63■■□□□ 1.05
RFTN1-201ENST00000334133 HOOK1Q9UJC3 728 aaKnown RBP21.63■■□□□ 1.05
RFTN1-201ENST00000334133 LDHBP07195 334 aaKnown RBP21.62■■□□□ 1.05
RFTN1-201ENST00000334133 CPVLQ9H3G5 476 aa21.62■■□□□ 1.05
RFTN1-201ENST00000334133 TTC38Q5R3I4 469 aa21.62■■□□□ 1.05
RFTN1-201ENST00000334133 RC3H1Q5TC82 1133 aaKnown RBP21.62■■□□□ 1.05
RFTN1-201ENST00000334133 MAPKAPK5Q8IW41 473 aa21.62■■□□□ 1.05
RFTN1-201ENST00000334133 CCDC150Q8NCX0 1101 aa21.62■■□□□ 1.05
RFTN1-201ENST00000334133 MAP7D2Q96T17 732 aa21.62■■□□□ 1.05
RFTN1-201ENST00000334133 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
RFTN1-201ENST00000334133 NCBP1Q09161 790 aaKnown RBP21.61■■□□□ 1.05
RFTN1-201ENST00000334133 TRAPPC3LQ5T215 181 aa21.61■■□□□ 1.05
RFTN1-201ENST00000334133 PPP1R13BQ96KQ4 1090 aa21.61■■□□□ 1.05
RFTN1-201ENST00000334133 TOP1P11387 765 aaKnown RBP21.61■■□□□ 1.05
RFTN1-201ENST00000334133 PPP4R3BQ5MIZ7 849 aa21.61■■□□□ 1.05
RFTN1-201ENST00000334133 CTIFO43310 598 aaKnown RBP21.6■■□□□ 1.05
RFTN1-201ENST00000334133 ORC4O43929 436 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 DDAH1O94760 285 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 BLZF1Q9H2G9 400 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 MKNK2Q9HBH9 465 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 BRMS1Q9HCU9 246 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 ARPP21Q9UBL0 812 aaPredicted RBP21.6■■□□□ 1.05
RFTN1-201ENST00000334133 CALM1P0DP23 149 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 CALM2P0DP24 149 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 CALM3P0DP25 149 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 SCG2P13521 617 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 PLCD1P51178 756 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 MORC3Q14149 939 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 PPP2R5BQ15173 497 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 KAT14Q9H8E8 782 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 PAXBP1Q9Y5B6 917 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 GOLGA8HP0CJ92 632 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms