RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TRIM31Q9BZY9 425 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 KIF20BQ96Q89 1820 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 RAPGEF1Q13905 1077 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 SLC44A4Q53GD3 710 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 SND1Q7KZF4 910 aaKnown RBP eCLIP11.37□□□□□ -0.592e-12■□□□□ 9.9
SPTBN1-201ENST00000333896 EFHD1Q9BUP0 239 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 SPOPO43791 374 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 FANCCQ00597 558 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 TRIM60Q495X7 471 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 SSH1Q8WYL5 1049 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 CEP19Q96LK0 163 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 ESYT1Q9BSJ8 1104 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 KIFC3Q9BVG8 833 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 BSDC1Q9NW68 430 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 RNF14Q9UBS8 474 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 WBP4O75554 376 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 KRT15P19012 456 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 MRPS35P82673 323 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 GJC2Q5T442 439 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 ZNF513Q8N8E2 541 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 VTI1AQ96AJ9 217 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 DCTN3O75935 186 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 TCP1P17987 556 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 TMTC2Q8N394 836 aa11.37□□□□□ -0.59
SPTBN1-201ENST00000333896 CCDC80Q76M96 950 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 MAIP1Q8WWC4 291 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 MCF2LO15068 1137 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 STX10O60499 249 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 ZSCAN20P17040 1043 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 MARCKSP29966 332 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 DIABLOQ9NR28 239 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 CYP2C19P33261 490 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 BASP1P80723 227 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 ETAA1Q9NY74 926 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 CCDC159P0C7I6 412 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 BIRC3Q13489 604 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 E2F5Q15329 346 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 INAQ16352 499 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 ZC3H18Q86VM9 953 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 CTAGE3PQ8IX95 158 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 CCDC124Q96CT7 223 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 REREQ9P2R6 1566 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 CCDC84Q86UT8 332 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 SPG7Q9UQ90 795 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 KDM1AO60341 852 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 IL9RQ01113 521 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 GNPTABQ3T906 1256 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 MFSD6Q6ZSS7 791 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 KIFAP3Q92845 792 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 RNF34Q969K3 372 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 CDC23Q9UJX2 597 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 E9PMD0 336 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 SERPINB10P48595 397 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 ARHGAP4P98171 946 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 PPP1R13BQ96KQ4 1090 aa11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 ORC3Q9UBD5 711 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-201ENST00000333896 IGHDP01880 384 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 CALM1P0DP23 149 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 CALM2P0DP24 149 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 CALM3P0DP25 149 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 KLHL29Q96CT2 875 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 TRIM55Q9BYV6 548 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 MYH13Q9UKX3 1938 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 TSPY2A6NKD2 308 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 TBC1D10BQ4KMP7 808 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 OPTNQ96CV9 577 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 LRGUKQ96M69 825 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 GSTA2P09210 222 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 CCT6AP40227 531 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 PDE4BQ07343 736 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 MMEL1Q495T6 779 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 FBXO38Q6PIJ6 1188 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 ARMCX6Q7L4S7 300 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 TBC1D23Q9NUY8 699 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 ZNF148Q9UQR1 794 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 KIF1BO60333 1816 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 PCF11O94913 1555 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 CASP2P42575 452 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 JADE1Q6IE81 842 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 SDSP20132 328 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 TRIM42Q8IWZ5 723 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 FBXO2Q9UK22 296 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 NLRP12P59046 1061 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 CYLC2Q14093 348 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 OCA2Q04671 838 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 SFMBT1Q9UHJ3 866 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 TTLL3Q9Y4R7 772 aa11.35□□□□□ -0.59
SPTBN1-201ENST00000333896 KLC1Q07866 573 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 SULT6B1Q6IMI4 303 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms