RNA–Protein interactions for RNA: ENST00000331536.7

CROT-201, Transcript of carnitine O-octanoyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CROT, Length 3,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-201ENST00000331536 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 DHX36Q9H2U1 1008 aaKnown RBP17.73■□□□□ 0.43
CROT-201ENST00000331536 CLIP2Q9UDT6 1046 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 CALM1P0DP23 149 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 CALM2P0DP24 149 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 CALM3P0DP25 149 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 IFNAR1P17181 557 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 NEDD1Q8NHV4 660 aa17.73■□□□□ 0.43
CROT-201ENST00000331536 GDF11O95390 407 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
CROT-201ENST00000331536 KRT85P78386 507 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 SH3BP5LQ7L8J4 393 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 MICALL2Q8IY33 904 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 MYOZ2Q9NPC6 264 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 LMBRD1Q9NUN5 540 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 ROBO3Q96MS0 1386 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 EGFRP00533 1210 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 FBXO18Q8NFZ0 1043 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 CPVLQ9H3G5 476 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 ADAMTSL1Q8N6G6 1762 aa17.72■□□□□ 0.43
CROT-201ENST00000331536 WNT10BO00744 389 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 SHROOM1Q2M3G4 852 aaPredicted RBP17.71■□□□□ 0.43
CROT-201ENST00000331536 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
CROT-201ENST00000331536 CLEC17AQ6ZS10 378 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 MIGA2Q7L4E1 593 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 CNOT7Q9UIV1 285 aaKnown RBP17.71■□□□□ 0.43
CROT-201ENST00000331536 KCNJ14Q9UNX9 436 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 TIAM2Q8IVF5 1701 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 DDAH1O94760 285 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 KIF5BP33176 963 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 SHMT1P34896 483 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 GABPAQ06546 454 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 CCDC178Q5BJE1 867 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 TMEM39BQ9GZU3 492 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
CROT-201ENST00000331536 KRT40Q6A162 431 aa17.71■□□□□ 0.42
CROT-201ENST00000331536 FMNL1O95466 1100 aaPredicted RBP17.7■□□□□ 0.42
CROT-201ENST00000331536 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
CROT-201ENST00000331536 USP17L2Q6R6M4 530 aa17.7■□□□□ 0.42
CROT-201ENST00000331536 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
CROT-201ENST00000331536 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
CROT-201ENST00000331536 GOLGA6L4A6NEF3 574 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 CAVIN1Q6NZI2 390 aaKnown RBP17.69■□□□□ 0.42
CROT-201ENST00000331536 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.42
CROT-201ENST00000331536 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.69■□□□□ 0.42
CROT-201ENST00000331536 ZNF541Q9H0D2 1346 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 PTMSP20962 102 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 RESTQ13127 1097 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 WASF1Q92558 559 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 ZSCAN16Q9H4T2 348 aaPredicted RBP17.69■□□□□ 0.42
CROT-201ENST00000331536 VPS54Q9P1Q0 977 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.69■□□□□ 0.42
CROT-201ENST00000331536 ENTPD3O75355 529 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 DEXIO95424 95 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 ATP2B1P20020 1258 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 SRBD1Q8N5C6 995 aaKnown RBP17.69■□□□□ 0.42
CROT-201ENST00000331536 RNF181Q9P0P0 153 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 DLEC1Q9Y238 1755 aa17.69■□□□□ 0.42
CROT-201ENST00000331536 LMNB1P20700 586 aa17.68■□□□□ 0.42
CROT-201ENST00000331536 SAFBQ15424 915 aaKnown RBP eCLIP17.68■□□□□ 0.42
CROT-201ENST00000331536 SKOR2Q2VWA4 1001 aaPredicted RBP17.68■□□□□ 0.42
CROT-201ENST00000331536 FOXP4Q8IVH2 680 aaPredicted RBP17.68■□□□□ 0.42
CROT-201ENST00000331536 SPATA32Q96LK8 384 aa17.68■□□□□ 0.42
CROT-201ENST00000331536 MTMR4Q9NYA4 1195 aa17.68■□□□□ 0.42
CROT-201ENST00000331536 TOP1P11387 765 aaKnown RBP17.68■□□□□ 0.42
CROT-201ENST00000331536 PPP2R5BQ15173 497 aa17.68■□□□□ 0.42
CROT-201ENST00000331536 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
CROT-201ENST00000331536 NBPF11Q86T75 865 aa17.68■□□□□ 0.42
CROT-201ENST00000331536 NAV1Q8NEY1 1877 aa17.68■□□□□ 0.42
CROT-201ENST00000331536 FRMPD2Q68DX3 1309 aaPredicted RBP17.67■□□□□ 0.42
CROT-201ENST00000331536 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
CROT-201ENST00000331536 H7C1D1 291 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 SEPT2Q15019 361 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 UBA5Q9GZZ9 404 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
CROT-201ENST00000331536 KIF13BQ9NQT8 1826 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 MYH1P12882 1939 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 ASTN2O75129 1339 aaPredicted RBP17.67■□□□□ 0.42
CROT-201ENST00000331536 PARP1P09874 1014 aaKnown RBP17.67■□□□□ 0.42
CROT-201ENST00000331536 RCAN1P53805 252 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 CCDC96Q2M329 555 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 GPCPD1Q9NPB8 672 aa17.67■□□□□ 0.42
CROT-201ENST00000331536 KLRF2D3W0D1 207 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 FZD9O00144 591 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 GH2P01242 217 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 XBP1P17861 261 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 RASA3Q14644 834 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 GPR162Q16538 588 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 ABCB5Q2M3G0 1257 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 FAM151AQ8WW52 585 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 CCDC17Q96LX7 622 aa17.66■□□□□ 0.42
CROT-201ENST00000331536 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
CROT-201ENST00000331536 CABP5Q9NP86 173 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms