RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 WDR18Q9BV38 432 aa20.72■□□□□ 0.91
SWSAP1-201ENST00000312423 TM4SF4P48230 202 aa20.71■□□□□ 0.91
SWSAP1-201ENST00000312423 TFAP4Q01664 338 aa20.71■□□□□ 0.91
SWSAP1-201ENST00000312423 ZYXQ15942 572 aaKnown RBP20.71■□□□□ 0.91
SWSAP1-201ENST00000312423 TACC3Q9Y6A5 838 aa20.71■□□□□ 0.91
SWSAP1-201ENST00000312423 A0A0G2JLL6 359 aaPredicted RBP20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 USP17L10C9JJH3 530 aa20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 ORC4O43929 436 aa20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 PCP11498 1178 aaKnown RBP20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 HMGCS2P54868 508 aa20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 OTUD7BQ6GQQ9 843 aa20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 PRRT2Q7Z6L0 340 aaPredicted RBP20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 IFNL1Q8IU54 200 aa20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 ARHGEF10LQ9HCE6 1279 aa20.7■□□□□ 0.91
SWSAP1-201ENST00000312423 NEDD4P46934 1319 aa20.7■□□□□ 0.9
SWSAP1-201ENST00000312423 BACE1P56817 501 aa20.7■□□□□ 0.9
SWSAP1-201ENST00000312423 FASTKD5Q7L8L6 764 aaKnown RBP20.7■□□□□ 0.9
SWSAP1-201ENST00000312423 ACER1Q8TDN7 264 aa20.7■□□□□ 0.9
SWSAP1-201ENST00000312423 KANSL2Q9H9L4 492 aa20.7■□□□□ 0.9
SWSAP1-201ENST00000312423 GREB1LQ9C091 1923 aaPredicted RBP20.69■□□□□ 0.9
SWSAP1-201ENST00000312423 TESPA1A2RU30 521 aaPredicted RBP20.69■□□□□ 0.9
SWSAP1-201ENST00000312423 IGF2BP3O00425 579 aaKnown RBP eCLIP20.69■□□□□ 0.9
SWSAP1-201ENST00000312423 REC8O95072 547 aa20.69■□□□□ 0.9
SWSAP1-201ENST00000312423 CYP21A2P08686 494 aa20.69■□□□□ 0.9
SWSAP1-201ENST00000312423 PTPN18Q99952 460 aa20.69■□□□□ 0.9
SWSAP1-201ENST00000312423 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
SWSAP1-201ENST00000312423 FGRP09769 529 aa20.68■□□□□ 0.9
SWSAP1-201ENST00000312423 DGKZQ13574 1117 aa20.68■□□□□ 0.9
SWSAP1-201ENST00000312423 NEDD1Q8NHV4 660 aa20.68■□□□□ 0.9
SWSAP1-201ENST00000312423 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.68■□□□□ 0.9
SWSAP1-201ENST00000312423 SH2D4AQ9H788 454 aa20.68■□□□□ 0.9
SWSAP1-201ENST00000312423 WBP1LQ9NX94 342 aa20.68■□□□□ 0.9
SWSAP1-201ENST00000312423 C19orf81C9J6K1 198 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 BTBD19C9JJ37 291 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 TRPA1O75762 1119 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 EEF2P13639 858 aaKnown RBP20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 ESR2Q92731 530 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 CEP95Q96GE4 821 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 PLIN4Q96Q06 1357 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 LOC285556D6RIA3 1793 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 B4E1Z4 1266 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 ALDH1A1P00352 501 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 HSPA1AP0DMV8 641 aaKnown RBP20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 HSPA1BP0DMV9 641 aaKnown RBP20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 USP14P54578 494 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 TRDNQ13061 729 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 USP17L2Q6R6M4 530 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 KRT23Q9C075 422 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 CNNM2Q9H8M5 875 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 RNF186Q9NXI6 227 aa20.67■□□□□ 0.9
SWSAP1-201ENST00000312423 A0A1W2PRG0 241 aa20.66■□□□□ 0.9
SWSAP1-201ENST00000312423 RAD21O60216 631 aa20.66■□□□□ 0.9
SWSAP1-201ENST00000312423 MOGSQ13724 837 aa20.66■□□□□ 0.9
SWSAP1-201ENST00000312423 SH3D19Q5HYK7 790 aa20.66■□□□□ 0.9
SWSAP1-201ENST00000312423 PROCA1Q8NCQ7 364 aaPredicted RBP20.66■□□□□ 0.9
SWSAP1-201ENST00000312423 MYH4Q9Y623 1939 aa20.66■□□□□ 0.9
SWSAP1-201ENST00000312423 SLC27A2O14975 620 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 KDM4AO75164 1064 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 RNF20Q5VTR2 975 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 CREB3L3Q68CJ9 461 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 RALYLQ86SE5 291 aaKnown RBP20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 ANKRD23Q86SG2 305 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 MTMR4Q9NYA4 1195 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 CLIP2Q9UDT6 1046 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 TAF6LQ9Y6J9 622 aa20.65■□□□□ 0.9
SWSAP1-201ENST00000312423 IGKV6D-41A0A0C4DH26 115 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 E7EWF7 191 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 PDHXO00330 501 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 CA12O43570 354 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 NMT2O60551 498 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 TTLL1O95922 423 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 NECTIN1Q15223 517 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 TAF1CQ15572 869 aaPredicted RBP20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 TREML2Q5T2D2 321 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 SIAH1Q8IUQ4 282 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 TSKSQ9UJT2 592 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 AGTPBP1Q9UPW5 1226 aa20.64■□□□□ 0.9
SWSAP1-201ENST00000312423 PCNTO95613 3336 aa20.64■□□□□ 0.89
SWSAP1-201ENST00000312423 PPP4R3BQ5MIZ7 849 aa20.64■□□□□ 0.89
SWSAP1-201ENST00000312423 GPAT2Q6NUI2 795 aa20.64■□□□□ 0.89
SWSAP1-201ENST00000312423 EMILIN3Q9NT22 766 aa20.64■□□□□ 0.89
SWSAP1-201ENST00000312423 SAGE1Q9NXZ1 904 aa20.64■□□□□ 0.89
SWSAP1-201ENST00000312423 NYAP2Q9P242 653 aa20.64■□□□□ 0.89
SWSAP1-201ENST00000312423 TMX2Q9Y320 296 aa20.64■□□□□ 0.89
SWSAP1-201ENST00000312423 TBC1D8O95759 1140 aa20.63■□□□□ 0.89
SWSAP1-201ENST00000312423 PABPC4Q13310 644 aaKnown RBP eCLIP20.63■□□□□ 0.89
SWSAP1-201ENST00000312423 IQCA1Q86XH1 822 aa20.63■□□□□ 0.89
SWSAP1-201ENST00000312423 ZKSCAN3Q9BRR0 538 aa20.63■□□□□ 0.89
SWSAP1-201ENST00000312423 GOPCQ9HD26 462 aa20.63■□□□□ 0.89
SWSAP1-201ENST00000312423 IL17RBQ9NRM6 502 aa20.63■□□□□ 0.89
SWSAP1-201ENST00000312423 NT5C2P49902 561 aa20.62■□□□□ 0.89
SWSAP1-201ENST00000312423 SPICE1Q8N0Z3 855 aa20.62■□□□□ 0.89
SWSAP1-201ENST00000312423 LRRC47Q8N1G4 583 aaKnown RBP20.62■□□□□ 0.89
SWSAP1-201ENST00000312423 NCOA7Q8NI08 942 aa20.62■□□□□ 0.89
SWSAP1-201ENST00000312423 NKX2-3Q8TAU0 364 aa20.62■□□□□ 0.89
SWSAP1-201ENST00000312423 ZCCHC17Q9NP64 241 aaKnown RBP20.62■□□□□ 0.89
SWSAP1-201ENST00000312423 FOXN1O15353 648 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms