RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
RHO-201ENST00000296271 AKAP17AQ02040 695 aaKnown RBP13.53□□□□□ -0.24
RHO-201ENST00000296271 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 GPKOWQ92917 476 aaPredicted RBP eCLIP13.53□□□□□ -0.24
RHO-201ENST00000296271 RNF26Q9BY78 433 aaPredicted RBP13.53□□□□□ -0.24
RHO-201ENST00000296271 FANCLQ9NW38 375 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 COL24A1Q17RW2 1714 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 TPM3P06753 285 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 TERF1P54274 439 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 TFAP4Q01664 338 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 SLC35G1Q2M3R5 365 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 ARMCX5Q6P1M9 558 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 MAPKAPK5Q8IW41 473 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 MED15Q96RN5 788 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 CNTNAP5Q8WYK1 1306 aa13.52□□□□□ -0.24
RHO-201ENST00000296271 TAF1LQ8IZX4 1826 aa13.52□□□□□ -0.25
RHO-201ENST00000296271 FAM237AA0A1B0GTK4 181 aa13.52□□□□□ -0.25
RHO-201ENST00000296271 AFMP43652 599 aa13.52□□□□□ -0.25
RHO-201ENST00000296271 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.25
RHO-201ENST00000296271 NAA30Q147X3 362 aaPredicted RBP13.52□□□□□ -0.25
RHO-201ENST00000296271 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
RHO-201ENST00000296271 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
RHO-201ENST00000296271 ZNF592Q92610 1267 aa13.52□□□□□ -0.25
RHO-201ENST00000296271 PRPF3O43395 683 aaKnown RBP13.51□□□□□ -0.25
RHO-201ENST00000296271 LDHBP07195 334 aaKnown RBP13.51□□□□□ -0.25
RHO-201ENST00000296271 CDC25AP30304 524 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 USP5P45974 858 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 FANCCQ00597 558 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 GRAPQ13588 217 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 RILPL1Q5EBL4 403 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 GRAPLQ8TC17 118 aaPredicted RBP13.51□□□□□ -0.25
RHO-201ENST00000296271 DHX58Q96C10 678 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 MAN1B1Q9UKM7 699 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 AFF2P51816 1311 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 SBF2Q86WG5 1849 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 SEMA3EO15041 775 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 GOLGA8HP0CJ92 632 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 TPD52L1Q16890 204 aaPredicted RBP13.51□□□□□ -0.25
RHO-201ENST00000296271 TYW1BQ6NUM6 668 aa13.51□□□□□ -0.25
RHO-201ENST00000296271 MKRN1Q9UHC7 482 aaKnown RBP13.51□□□□□ -0.25
RHO-201ENST00000296271 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 GYS1P13807 737 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 KRT2P35908 639 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 PIK3AP1Q6ZUJ8 805 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 SMYD4Q8IYR2 804 aaPredicted RBP13.5□□□□□ -0.25
RHO-201ENST00000296271 ACTN4O43707 911 aaKnown RBP13.5□□□□□ -0.25
RHO-201ENST00000296271 ORC4O43929 436 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 UFL1O94874 794 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 SLURP2P0DP57 97 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 TNNT1P13805 278 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 POSTNQ15063 836 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
RHO-201ENST00000296271 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
RHO-201ENST00000296271 FAM205AQ6ZU69 1335 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 C12orf60Q5U649 245 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 BPIFA3Q9BQP9 254 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 INTS13Q9NVM9 706 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 KIAA1551Q9HCM1 1747 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 VWA3AA6NCI4 1184 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 TRIM75PA6NK02 468 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 IL17AQ16552 155 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
RHO-201ENST00000296271 SYMPKQ92797 1274 aaKnown RBP13.49□□□□□ -0.25
RHO-201ENST00000296271 MTA3Q9BTC8 594 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 THSD7AQ9UPZ6 1657 aa13.49□□□□□ -0.25
RHO-201ENST00000296271 DYNC1I1O14576 645 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 SERPINB2P05120 415 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 DDR1Q08345 913 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 PTGDRQ13258 359 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
RHO-201ENST00000296271 MXD3Q9BW11 206 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 POLLQ9UGP5 575 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 CCDC88AQ3V6T2 1871 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 TRIM37O94972 964 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 MCM7P33993 719 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 HSPA1LP34931 641 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 NLRP5P59047 1200 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 MYL5Q02045 173 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 ARPP21Q9UBL0 812 aaPredicted RBP13.48□□□□□ -0.25
RHO-201ENST00000296271 UTRNP46939 3433 aa13.48□□□□□ -0.25
RHO-201ENST00000296271 XDHP47989 1333 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
RHO-201ENST00000296271 RIMBP2O15034 1052 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 CYTH3O43739 400 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 SERPINC1P01008 464 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 RCAN1P53805 252 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 STX17P56962 302 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 UBASH3AP57075 661 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 PNMA1Q8ND90 353 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 RGS22Q8NE09 1264 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 PRIMPOLQ96LW4 560 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 MKNK2Q9HBH9 465 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 CD209Q9NNX6 404 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms