RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SRBD1Q8N5C6 995 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 CCDC112Q8NEF3 446 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 RREB1Q92766 1687 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 GTF2F1P35269 517 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■■□ 23.4
NCKIPSD-201ENST00000294129 SMARCE1Q969G3 411 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 ANKRD2Q9GZV1 360 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 HOOK1Q9UJC3 728 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 NID2Q14112 1375 aa18.08■□□□□ 0.49
NCKIPSD-201ENST00000294129 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.08■□□□□ 0.49
NCKIPSD-201ENST00000294129 CEP131Q9UPN4 1083 aa18.08■□□□□ 0.49
NCKIPSD-201ENST00000294129 V9GYY5 206 aaPredicted RBP18.08■□□□□ 0.49
NCKIPSD-201ENST00000294129 CDK11BP21127 795 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-201ENST00000294129 FUT2Q10981 343 aa18.08■□□□□ 0.48
NCKIPSD-201ENST00000294129 GRIK5Q16478 980 aa18.08■□□□□ 0.48
NCKIPSD-201ENST00000294129 CCAR2Q8N163 923 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-201ENST00000294129 USP21Q9UK80 565 aa18.08■□□□□ 0.48
NCKIPSD-201ENST00000294129 VWA3AA6NCI4 1184 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 IKBKBO14920 756 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 ADAMTS3O15072 1205 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 NLRP5P59047 1200 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 FMR1Q06787 632 aaKnown RBP eCLIP18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 VPS72Q15906 364 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 TMTC3Q6ZXV5 915 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 PHF20Q9BVI0 1012 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 OSBPL5Q9H0X9 879 aaPredicted RBP18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 SAP30BPQ9UHR5 308 aaKnown RBP18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 SRPRBQ9Y5M8 271 aaKnown RBP18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 DUOX1Q9NRD9 1551 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 A0A087X0B3 334 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 FAM237AA0A1B0GTK4 181 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 PIK3AP1Q6ZUJ8 805 aa18.07■□□□□ 0.48
NCKIPSD-201ENST00000294129 PRPF3O43395 683 aaKnown RBP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 FAM196AQ6ZSG2 479 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 SLC44A5Q8NCS7 719 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 RGS22Q8NE09 1264 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 MTA3Q9BTC8 594 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 BRMS1Q9HCU9 246 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 NFE2L3Q9Y4A8 694 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 COBLO75128 1261 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 STX17P56962 302 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 MDM2Q00987 491 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 TFAP4Q01664 338 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 SH3RF3Q8TEJ3 882 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 GPKOWQ92917 476 aaPredicted RBP eCLIP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 RBM28Q9NW13 759 aaKnown RBP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 IMPACTQ9P2X3 320 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 SEMA3EO15041 775 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 MCM7P33993 719 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 SMYD4Q8IYR2 804 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 CCDC150Q8NCX0 1101 aa18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 SYMPKQ92797 1274 aaKnown RBP18.06■□□□□ 0.48
NCKIPSD-201ENST00000294129 A0A1B0GUL6 1792 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 TM4SF1P30408 202 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 CNTNAP5Q8WYK1 1306 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 USP17L3A6NCW0 530 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 USP17L4A6NCW7 530 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 TOP1P11387 765 aaKnown RBP18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 RCAN1P53805 252 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 E4F1Q66K89 784 aaPredicted RBP18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 USP17L1Q7RTZ2 530 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 RASGRP4Q8TDF6 673 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 TGFBRAP1Q8WUH2 860 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 MKNK2Q9HBH9 465 aa18.05■□□□□ 0.48
NCKIPSD-201ENST00000294129 ACTN4O43707 911 aaKnown RBP18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 CALM1P0DP23 149 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 CALM2P0DP24 149 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 CALM3P0DP25 149 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 PTGDRQ13258 359 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 TTC38Q5R3I4 469 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 ATP8A2Q9NTI2 1148 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 LTBP4Q8N2S1 1624 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 MAPKAPK5Q8IW41 473 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 SAMSN1Q9NSI8 373 aaKnown RBP18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 ARPP21Q9UBL0 812 aaPredicted RBP18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 SCN7AQ01118 1682 aa18.04■□□□□ 0.48
NCKIPSD-201ENST00000294129 DDAH1O94760 285 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 CDC25AP30304 524 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 STX8Q9UNK0 236 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 NRDCO43847 1150 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 PPP2R5BQ15173 497 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 RASGRP2Q7LDG7 609 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 HOMER1Q86YM7 354 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 PAXBP1Q9Y5B6 917 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 CBFA2T2O43439 604 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 SCG2P13521 617 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 CREBRFQ8IUR6 639 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 PDCL2Q8N4E4 241 aa18.03■□□□□ 0.48
NCKIPSD-201ENST00000294129 ORC4O43929 436 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms