RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 SLFNL1Q499Z3 407 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 TMEM67Q5HYA8 995 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CYP4F22Q6NT55 531 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 MLKLQ8NB16 471 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 ERO1AQ96HE7 468 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 MPHOSPH8Q99549 860 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 GNL3LQ9NVN8 582 aaKnown RBP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 IQSEC3Q9UPP2 1182 aaPredicted RBP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 MYO5AQ9Y4I1 1855 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 IFIT3O14879 490 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 ECE1P42892 770 aa11.57□□□□□ -0.56
CPNE9-201ENST00000273027 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
CPNE9-201ENST00000273027 CREBRFQ8IUR6 639 aa11.57□□□□□ -0.56
CPNE9-201ENST00000273027 FAM177A1Q8N128 213 aaPredicted RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 CCAR2Q8N163 923 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 KRI1Q8N9T8 703 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 RNF26Q9BY78 433 aaPredicted RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 RBM28Q9NW13 759 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 NRBP1Q9UHY1 535 aa11.57□□□□□ -0.56
CPNE9-201ENST00000273027 ZNF652Q9Y2D9 606 aa11.57□□□□□ -0.56
CPNE9-201ENST00000273027 PDS5AQ29RF7 1337 aaKnown RBP11.57□□□□□ -0.56
CPNE9-201ENST00000273027 SEMA3EO15041 775 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 MMP1P03956 469 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 TPM1P09493 284 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 WTAPQ15007 396 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 HLFQ16534 295 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 CCDC144BQ3MJ40 725 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 UTP14CQ5TAP6 766 aaKnown RBP11.56□□□□□ -0.56
CPNE9-201ENST00000273027 NT5DC1Q5TFE4 455 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 CLEC4GQ6UXB4 293 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 CYB5R4Q7L1T6 521 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 NOSTRINQ8IVI9 506 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 CCDC144CPQ8IYA2 1237 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 RTKN2Q8IZC4 609 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 SYNE4Q8N205 404 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 C16orf45Q96MC5 204 aaPredicted RBP11.56□□□□□ -0.56
CPNE9-201ENST00000273027 MAP3K14Q99558 947 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 GTPBP4Q9BZE4 634 aaKnown RBP11.56□□□□□ -0.56
CPNE9-201ENST00000273027 MCOLN1Q9GZU1 580 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 PIH1D3Q9NQM4 214 aaKnown RBP11.56□□□□□ -0.56
CPNE9-201ENST00000273027 OGFRQ9NZT2 677 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 GJA3Q9Y6H8 435 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 NEDD4P46934 1319 aa11.56□□□□□ -0.56
CPNE9-201ENST00000273027 MYH6P13533 1939 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 B4E1Z4 1266 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 FZD9O00144 591 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 ZSCAN12O43309 604 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 AOC2O75106 756 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 NPR1P16066 1061 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 PTPREP23469 700 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 PHKA1P46020 1223 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 TUBB4BP68371 445 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 FANCCQ00597 558 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 LRMPQ12912 555 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 UBE4AQ14139 1066 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 RTN1Q16799 776 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
CPNE9-201ENST00000273027 TBC1D10CQ8IV04 446 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 GPC2Q8N158 579 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 ZNF710Q8N1W2 664 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 C17orf53Q8N3J3 647 aaPredicted RBP11.55□□□□□ -0.56
CPNE9-201ENST00000273027 MPNDQ8N594 471 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 CNNM3Q8NE01 707 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 JDP2Q8WYK2 163 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 ESR2Q92731 530 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 FTOQ9C0B1 505 aaKnown RBP eCLIP11.55□□□□□ -0.56
CPNE9-201ENST00000273027 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 ZSWIM5Q9P217 1185 aa11.55□□□□□ -0.56
CPNE9-201ENST00000273027 GSG1L2A8MUP6 293 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 KIF28PB7ZC32 967 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 TRAF5O00463 557 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 CAMTA2O94983 1202 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 SMC2O95347 1197 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 SLU7O95391 586 aaKnown RBP11.54□□□□□ -0.56
CPNE9-201ENST00000273027 ERCC5P28715 1186 aaPredicted RBP11.54□□□□□ -0.56
CPNE9-201ENST00000273027 LMOD1P29536 600 aaPredicted RBP11.54□□□□□ -0.56
CPNE9-201ENST00000273027 FOSBP53539 338 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 UBASH3AP57075 661 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 AKAP17AQ02040 695 aaKnown RBP11.54□□□□□ -0.56
CPNE9-201ENST00000273027 NCAPHQ15003 741 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 DPCR1Q3MIW9 517 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 CST9Q5W186 159 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 FILIP1Q7Z7B0 1213 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 NBPF11Q86T75 865 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 ENOX1Q8TC92 643 aaKnown RBP11.54□□□□□ -0.56
CPNE9-201ENST00000273027 XPO4Q9C0E2 1151 aaKnown RBP11.54□□□□□ -0.56
CPNE9-201ENST00000273027 BRMS1Q9HCU9 246 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 IFNKQ9P0W0 207 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 KCNH3Q9ULD8 1083 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 SRPRBQ9Y5M8 271 aaKnown RBP11.54□□□□□ -0.56
CPNE9-201ENST00000273027 UBN2Q6ZU65 1347 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 PHLPP2Q6ZVD8 1323 aa11.54□□□□□ -0.56
CPNE9-201ENST00000273027 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 DTNBO60941 627 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms