RNA–Protein interactions for RNA: ENST00000262193.6

PSMB1-201, Transcript of proteasome subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB1-201ENST00000262193 PTPN18Q99952 460 aa13.11□□□□□ -0.31
PSMB1-201ENST00000262193 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
PSMB1-201ENST00000262193 RBM8AQ9Y5S9 174 aaKnown RBP13.11□□□□□ -0.31
PSMB1-201ENST00000262193 LOC285556D6RIA3 1793 aa13.11□□□□□ -0.31
PSMB1-201ENST00000262193 PLIN4Q96Q06 1357 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 FGRP09769 529 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 TSPY3P0CV98 308 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 TSPY8P0CW00 308 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
PSMB1-201ENST00000262193 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
PSMB1-201ENST00000262193 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
PSMB1-201ENST00000262193 BACE1P56817 501 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 MOGSQ13724 837 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 FAM47AQ5JRC9 791 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
PSMB1-201ENST00000262193 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
PSMB1-201ENST00000262193 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
PSMB1-201ENST00000262193 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 NEDD4P46934 1319 aa13.1□□□□□ -0.31
PSMB1-201ENST00000262193 IGKV6D-41A0A0C4DH26 115 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 CA12O43570 354 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
PSMB1-201ENST00000262193 TRPA1O75762 1119 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 CYP21A2P08686 494 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 TFAP4Q01664 338 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 DGKZQ13574 1117 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 ZYXQ15942 572 aaKnown RBP13.09□□□□□ -0.31
PSMB1-201ENST00000262193 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 ANKRD23Q86SG2 305 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 RNF186Q9NXI6 227 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
PSMB1-201ENST00000262193 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 C19orf81C9J6K1 198 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
PSMB1-201ENST00000262193 GPAT2Q6NUI2 795 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
PSMB1-201ENST00000262193 ESR2Q92731 530 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 ZCCHC17Q9NP64 241 aaKnown RBP13.08□□□□□ -0.32
PSMB1-201ENST00000262193 SAGE1Q9NXZ1 904 aa13.08□□□□□ -0.32
PSMB1-201ENST00000262193 PDHXO00330 501 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 FOXN1O15353 648 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 REC8O95072 547 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 USP14P54578 494 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 TAF1CQ15572 869 aaPredicted RBP13.07□□□□□ -0.32
PSMB1-201ENST00000262193 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 TMX2Q9Y320 296 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
PSMB1-201ENST00000262193 B4E1Z4 1266 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 SLC27A2O14975 620 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 NMT2O60551 498 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 KDM4AO75164 1064 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 TTLL1O95922 423 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 NT5C2P49902 561 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 NKX2-3Q8TAU0 364 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 PARK7Q99497 189 aaKnown RBP13.06□□□□□ -0.32
PSMB1-201ENST00000262193 KRT23Q9C075 422 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 MTMR4Q9NYA4 1195 aa13.06□□□□□ -0.32
PSMB1-201ENST00000262193 PCNTO95613 3336 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 E7EWF7 191 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 TBC1D8O95759 1140 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 VCAM1P19320 739 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 CTCFP49711 727 aaPredicted RBP13.05□□□□□ -0.32
PSMB1-201ENST00000262193 TRDNQ13061 729 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.327e-40■■■■■ 28.4
PSMB1-201ENST00000262193 CRHR2Q13324 411 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 STOX1Q6ZVD7 989 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 RALYLQ86SE5 291 aaKnown RBP13.05□□□□□ -0.32
PSMB1-201ENST00000262193 LRRC47Q8N1G4 583 aaKnown RBP13.05□□□□□ -0.32
PSMB1-201ENST00000262193 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 VCPKMTQ9H867 229 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 ZFYVE28Q9HCC9 887 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 IL17RBQ9NRM6 502 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
PSMB1-201ENST00000262193 PNMA3Q9UL41 463 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms