RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 ATP5JP18859 108 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 TERF1P54274 439 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 SMC1AQ14683 1233 aaKnown RBP7.17□□□□□ -1.26
BRIP1-201ENST00000259008 GRIPAP1Q4V328 841 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 PNMA1Q8ND90 353 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 TTLL11Q8NHH1 800 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 ZMYM4Q5VZL5 1548 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 PABPN1LA6NDY0 278 aaKnown RBP7.17□□□□□ -1.26
BRIP1-201ENST00000259008 TMCO5BA8MYB1 307 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 M0R2C6 588 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 PRKAB2O43741 272 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 STAT2P52630 851 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 NONOQ15233 471 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRIP1-201ENST00000259008 PRR5LQ6MZQ0 368 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 MYCT1Q8N699 235 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 EAF2Q96CJ1 260 aaPredicted RBP7.17□□□□□ -1.26
BRIP1-201ENST00000259008 LZTS2Q9BRK4 669 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 MXD3Q9BW11 206 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 ZNRF3Q9ULT6 936 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 LRRIQ1Q96JM4 1722 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 CIAO1O76071 339 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 KMT5BQ4FZB7 885 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 ANGEL2Q5VTE6 544 aaKnown RBP7.17□□□□□ -1.26
BRIP1-201ENST00000259008 OTUD6AQ7L8S5 288 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 GLT8D2Q9H1C3 349 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 FRMD4BQ9Y2L6 1034 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 AGLP35573 1532 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 KIDINS220Q9ULH0 1771 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 CYP2D7A0A087X1C5 515 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 TOP1P11387 765 aaKnown RBP7.17□□□□□ -1.26
BRIP1-201ENST00000259008 ARHGAP29Q52LW3 1261 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 SP8Q8IXZ3 490 aa7.17□□□□□ -1.26
BRIP1-201ENST00000259008 ZC3H13Q5T200 1668 aaKnown RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 PREX1Q8TCU6 1659 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 PNPLA6Q8IY17 1366 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 KLRF2D3W0D1 207 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 E7EWF7 191 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 GBP2P32456 591 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 ITPK1Q13572 414 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 NKX1-1Q15270 411 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 RSPH3Q86UC2 560 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 LCORLQ8N3X6 602 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 OTUD6BQ8N6M0 293 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 DEPTORQ8TB45 409 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 GGA3Q9NZ52 723 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 SERPINB13Q9UIV8 391 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 INO80Q9ULG1 1556 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 PSMD14O00487 310 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 GH2P01242 217 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 LMNB1P20700 586 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 MARK3P27448 753 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 RNASELQ05823 741 aaKnown RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 FAM160B1Q5W0V3 765 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 CCDC65Q8IXS2 484 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 SNX29Q8TEQ0 813 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 DHX36Q9H2U1 1008 aaKnown RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 CD209Q9NNX6 404 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 FAM170AA1A519 330 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 ZBTB24O43167 697 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 YEATS4O95619 227 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 EEF2P13639 858 aaKnown RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 CCND2P30279 289 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 GMPSP49915 693 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 XKR9Q5GH70 373 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 WDR44Q5JSH3 913 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 DYMQ7RTS9 669 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 REXO1Q8N1G1 1221 aaKnown RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 SPAG5Q96R06 1193 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 MED10Q9BTT4 135 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 ANTXR1Q9H6X2 564 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 ADD3Q9UEY8 706 aaKnown RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 SEPT9Q9UHD8 586 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 PRPF6O94906 941 aaKnown RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 ZSCAN22P10073 491 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 SOS2Q07890 1332 aaPredicted RBP7.16□□□□□ -1.26
BRIP1-201ENST00000259008 PTPRUQ92729 1446 aa7.16□□□□□ -1.26
BRIP1-201ENST00000259008 SLC8A3P57103 927 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 CCDC183Q5T5S1 534 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 PODNQ7Z5L7 613 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 TAX1BP1Q86VP1 789 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 RETREG2Q8NC44 543 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 KCNG4Q8TDN1 519 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 RNF123Q5XPI4 1314 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 SPTLC2O15270 562 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 KRT9P35527 623 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 KRT25Q7Z3Z0 450 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 ZBTB33Q86T24 672 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 PLA2G4DQ86XP0 818 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 GOLGA1Q92805 767 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 HAUS7Q99871 368 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 FERMT1Q9BQL6 677 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 PCDHA1Q9Y5I3 950 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 TNKSO95271 1327 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 TNPO2O14787 897 aaKnown RBP7.15□□□□□ -1.26
BRIP1-201ENST00000259008 BMP3P12645 472 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 ERCC3P19447 782 aa7.15□□□□□ -1.26
BRIP1-201ENST00000259008 POLGP54098 1239 aaPredicted RBP7.15□□□□□ -1.26
BRIP1-201ENST00000259008 ARPP19P56211 112 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms