RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 EPSTI1Q96J88 318 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 RBM28Q9NW13 759 aaKnown RBP19.9■□□□□ 0.78
LRFN3-201ENST00000246529 ANKIB1Q9P2G1 1089 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 CEP131Q9UPN4 1083 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 CNTNAP5Q8WYK1 1306 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 IRS2Q9Y4H2 1338 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 TMEM232C9JQI7 657 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 ACTN4O43707 911 aaKnown RBP19.9■□□□□ 0.78
LRFN3-201ENST00000246529 ORC4O43929 436 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 NFIXQ14938 502 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 ZNF174Q15697 407 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 NPY5RQ15761 445 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 ATP8A2Q9NTI2 1148 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 DDAH1O94760 285 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 FMR1Q06787 632 aaKnown RBP eCLIP19.89■□□□□ 0.77
LRFN3-201ENST00000246529 GOLGA8FQ08AF8 430 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 GOLGA8DPQ0D2H9 430 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
LRFN3-201ENST00000246529 ZNF579Q8NAF0 562 aaKnown RBP19.89■□□□□ 0.77
LRFN3-201ENST00000246529 TSPY2A6NKD2 308 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 RGL2O15211 777 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 CALM1P0DP23 149 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 CALM2P0DP24 149 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 CALM3P0DP25 149 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 PCP11498 1178 aaKnown RBP19.89■□□□□ 0.77
LRFN3-201ENST00000246529 CFAP100Q494V2 611 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 NYAP1Q6ZVC0 841 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 DHX58Q96C10 678 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 DYNLL2Q96FJ2 89 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 USP21Q9UK80 565 aa19.89■□□□□ 0.77
LRFN3-201ENST00000246529 PDS5AQ29RF7 1337 aaKnown RBP19.88■□□□□ 0.77
LRFN3-201ENST00000246529 SFPQP23246 707 aaKnown RBP eCLIP19.88■□□□□ 0.77
LRFN3-201ENST00000246529 CASP1P29466 404 aa19.88■□□□□ 0.77
LRFN3-201ENST00000246529 RFC4P35249 363 aa19.88■□□□□ 0.77
LRFN3-201ENST00000246529 DIXDC1Q155Q3 683 aa19.88■□□□□ 0.77
LRFN3-201ENST00000246529 PTPN14Q15678 1187 aa19.88■□□□□ 0.77
LRFN3-201ENST00000246529 CTCFLQ8NI51 663 aaPredicted RBP19.88■□□□□ 0.77
LRFN3-201ENST00000246529 MAP7D2Q96T17 732 aa19.88■□□□□ 0.77
LRFN3-201ENST00000246529 MYH13Q9UKX3 1938 aa19.88■□□□□ 0.77
LRFN3-201ENST00000246529 BTAF1O14981 1849 aa19.88■□□□□ 0.77
LRFN3-201ENST00000246529 UBAP1LF5GYI3 381 aa19.87■□□□□ 0.77
LRFN3-201ENST00000246529 E4F1Q66K89 784 aaPredicted RBP19.87■□□□□ 0.77
LRFN3-201ENST00000246529 CCDC150Q8NCX0 1101 aa19.87■□□□□ 0.77
LRFN3-201ENST00000246529 SMARCE1Q969G3 411 aa19.87■□□□□ 0.77
LRFN3-201ENST00000246529 ARPP21Q9UBL0 812 aaPredicted RBP19.87■□□□□ 0.77
LRFN3-201ENST00000246529 HOOK1Q9UJC3 728 aaKnown RBP19.87■□□□□ 0.77
LRFN3-201ENST00000246529 TNRC6CQ9HCJ0 1690 aaKnown RBP19.87■□□□□ 0.77
LRFN3-201ENST00000246529 CTIFO43310 598 aaKnown RBP19.87■□□□□ 0.77
LRFN3-201ENST00000246529 RCSD1Q6JBY9 416 aa19.87■□□□□ 0.77
LRFN3-201ENST00000246529 SH3RF3Q8TEJ3 882 aaPredicted RBP19.87■□□□□ 0.77
LRFN3-201ENST00000246529 TNFRSF25Q93038 417 aa19.87■□□□□ 0.77
LRFN3-201ENST00000246529 SARSP49591 514 aaKnown RBP19.86■□□□□ 0.77
LRFN3-201ENST00000246529 NAA30Q147X3 362 aaPredicted RBP19.86■□□□□ 0.77
LRFN3-201ENST00000246529 INTS13Q9NVM9 706 aa19.86■□□□□ 0.77
LRFN3-201ENST00000246529 COL24A1Q17RW2 1714 aa19.86■□□□□ 0.77
LRFN3-201ENST00000246529 AFMP43652 599 aa19.86■□□□□ 0.77
LRFN3-201ENST00000246529 FAM196AQ6ZSG2 479 aa19.86■□□□□ 0.77
LRFN3-201ENST00000246529 FNBP4Q8N3X1 1017 aaPredicted RBP19.86■□□□□ 0.77
LRFN3-201ENST00000246529 SYMPKQ92797 1274 aaKnown RBP19.86■□□□□ 0.77
LRFN3-201ENST00000246529 TFAP4Q01664 338 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 MORC3Q14149 939 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 SBK1Q52WX2 424 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 NT5DC1Q5TFE4 455 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 ELOA2Q8IYF1 753 aaPredicted RBP19.85■□□□□ 0.77
LRFN3-201ENST00000246529 CCDC112Q8NEF3 446 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 MED15Q96RN5 788 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 BAZ2BQ9UIF8 2168 aaKnown RBP19.85■□□□□ 0.77
LRFN3-201ENST00000246529 LDHBP07195 334 aaKnown RBP19.85■□□□□ 0.77
LRFN3-201ENST00000246529 USP5P45974 858 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 TRAPPC3LQ5T215 181 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 IL17RBQ9NRM6 502 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 PAXBP1Q9Y5B6 917 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 MYH6P13533 1939 aa19.85■□□□□ 0.77
LRFN3-201ENST00000246529 TTC38Q5R3I4 469 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 PIK3AP1Q6ZUJ8 805 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 BRMS1Q9HCU9 246 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 MTMR7Q9Y216 660 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 NFE2L3Q9Y4A8 694 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 VWA3AA6NCI4 1184 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 SCG2P13521 617 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 NLRP5P59047 1200 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 GRAPQ13588 217 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 GRAPLQ8TC17 118 aaPredicted RBP19.84■□□□□ 0.77
LRFN3-201ENST00000246529 EP400Q96L91 3159 aa19.84■□□□□ 0.77
LRFN3-201ENST00000246529 PTGDRQ13258 359 aa19.83■□□□□ 0.77
LRFN3-201ENST00000246529 SLC44A5Q8NCS7 719 aa19.83■□□□□ 0.77
LRFN3-201ENST00000246529 PPP1R13BQ96KQ4 1090 aa19.83■□□□□ 0.77
LRFN3-201ENST00000246529 MKRN1Q9UHC7 482 aaKnown RBP19.83■□□□□ 0.77
LRFN3-201ENST00000246529 USP17L3A6NCW0 530 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 USP17L4A6NCW7 530 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 CBFA2T2O43439 604 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 C12orf60Q5U649 245 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 SPTY2D1Q68D10 685 aaPredicted RBP19.83■□□□□ 0.76
LRFN3-201ENST00000246529 USP17L1Q7RTZ2 530 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 MTERF4Q7Z6M4 381 aaKnown RBP19.83■□□□□ 0.76
LRFN3-201ENST00000246529 VSTM4Q8IW00 320 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 STAG2Q8N3U4 1231 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 CNBD1Q8NA66 436 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 STAMQ92783 540 aa19.83■□□□□ 0.76
LRFN3-201ENST00000246529 GPKOWQ92917 476 aaPredicted RBP eCLIP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms