RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 TRAK2O60296 914 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 PLEKHA8P1O95397 391 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 BRD1O95696 1058 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 RASA3Q14644 834 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 KIF4BQ2VIQ3 1234 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 LARP1BQ659C4 914 aaKnown RBP15.09■□□□□ 0.01
HIF3A-201ENST00000244302 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 CDC37L1Q7L3B6 337 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 NBPF11Q86T75 865 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 FERMT3Q86UX7 667 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
HIF3A-201ENST00000244302 FANCBQ8NB91 859 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 NEDD1Q8NHV4 660 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 ENTPD3O75355 529 aa15.08■□□□□ 0.01
HIF3A-201ENST00000244302 RPS12P25398 132 aaKnown RBP15.08■□□□□ 0.01
HIF3A-201ENST00000244302 GPC2Q8N158 579 aa15.08■□□□□ 0.01
HIF3A-201ENST00000244302 STAG2Q8N3U4 1231 aa15.08■□□□□ 0.01
HIF3A-201ENST00000244302 FAM151AQ8WW52 585 aa15.08■□□□□ 0.01
HIF3A-201ENST00000244302 PIBF1Q8WXW3 757 aa15.08■□□□□ 0.01
HIF3A-201ENST00000244302 MTMR6Q9Y217 621 aa15.08■□□□□ 0.01
HIF3A-201ENST00000244302 VPS37CA5D8V6 355 aaPredicted RBP15.08■□□□□ 0
HIF3A-201ENST00000244302 SOCS7O14512 581 aa15.08■□□□□ 0
HIF3A-201ENST00000244302 STX6O43752 255 aa15.08■□□□□ 0
HIF3A-201ENST00000244302 GOLGA8HP0CJ92 632 aa15.08■□□□□ 0
HIF3A-201ENST00000244302 VEGFAP15692 232 aaPredicted RBP15.08■□□□□ 0
HIF3A-201ENST00000244302 TMOD2Q9NZR1 351 aa15.08■□□□□ 0
HIF3A-201ENST00000244302 CPLX1O14810 134 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 ANGEL2Q5VTE6 544 aaKnown RBP15.07■□□□□ 0
HIF3A-201ENST00000244302 CCDC84Q86UT8 332 aaPredicted RBP15.07■□□□□ 0
HIF3A-201ENST00000244302 LRRC47Q8N1G4 583 aaKnown RBP15.07■□□□□ 0
HIF3A-201ENST00000244302 DHX36Q9H2U1 1008 aaKnown RBP15.07■□□□□ 0
HIF3A-201ENST00000244302 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
HIF3A-201ENST00000244302 ATP2B2Q01814 1243 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 RTN1Q16799 776 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 SLC35G1Q2M3R5 365 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 SIAH1Q8IUQ4 282 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 PNMA1Q8ND90 353 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 TEPSINQ96N21 525 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 GBP4Q96PP9 640 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
HIF3A-201ENST00000244302 H7C1D1 291 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 MYO1BO43795 1136 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 MRE11P49959 708 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 SEPT2Q15019 361 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 CERKLQ49MI3 558 aaPredicted RBP15.06■□□□□ 0
HIF3A-201ENST00000244302 TATDN1Q6P1N9 297 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 SYNE3Q6ZMZ3 975 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 CATIPQ7Z7H3 387 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 TMTC2Q8N394 836 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 SLC26A6Q9BXS9 759 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 EHD4Q9H223 541 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.06■□□□□ 0
HIF3A-201ENST00000244302 MTMR4Q9NYA4 1195 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
HIF3A-201ENST00000244302 ATRNL1Q5VV63 1379 aa15.06■□□□□ 0
HIF3A-201ENST00000244302 IGKV6D-41A0A0C4DH26 115 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 NUCB2P80303 420 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 SKOR2Q2VWA4 1001 aaPredicted RBP15.05■□□□□ 0
HIF3A-201ENST00000244302 NBPF12Q5TAG4 269 aaPredicted RBP15.05■□□□□ 0
HIF3A-201ENST00000244302 USP17L2Q6R6M4 530 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 DGKHQ86XP1 1220 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 FOXP4Q8IVH2 680 aaPredicted RBP15.05■□□□□ 0
HIF3A-201ENST00000244302 SRBD1Q8N5C6 995 aaKnown RBP15.05■□□□□ 0
HIF3A-201ENST00000244302 SHISA4Q96DD7 197 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 LLPHQ9BRT6 129 aaKnown RBP15.05■□□□□ 0
HIF3A-201ENST00000244302 DEFB129Q9H1M3 183 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 KAT14Q9H8E8 782 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 TCP11L1Q9NUJ3 509 aa15.05■□□□□ 0
HIF3A-201ENST00000244302 METTL16Q86W50 562 aaKnown RBP15.05■□□□□ -0
HIF3A-201ENST00000244302 FAM184AQ8NB25 1140 aa15.05■□□□□ -0
HIF3A-201ENST00000244302 MTA3Q9BTC8 594 aa15.05■□□□□ -0
HIF3A-201ENST00000244302 ZNF287Q9HBT7 754 aa15.05■□□□□ -0
HIF3A-201ENST00000244302 GDPD2Q9HCC8 539 aa15.05■□□□□ -0
HIF3A-201ENST00000244302 USP17L5A8MUK1 530 aa15.04■□□□□ -0
HIF3A-201ENST00000244302 BAG4O95429 457 aaKnown RBP15.04■□□□□ -0
HIF3A-201ENST00000244302 GH2P01242 217 aa15.04■□□□□ -0
HIF3A-201ENST00000244302 ZSCAN22P10073 491 aaPredicted RBP15.04■□□□□ -0
HIF3A-201ENST00000244302 FUT2Q10981 343 aa15.04■□□□□ -0
HIF3A-201ENST00000244302 ANKS1AQ92625 1134 aa15.04■□□□□ -0
HIF3A-201ENST00000244302 SWAP70Q9UH65 585 aa15.04■□□□□ -0
HIF3A-201ENST00000244302 DICER1Q9UPY3 1922 aaKnown RBP15.04■□□□□ -0
HIF3A-201ENST00000244302 XRCC6P12956 609 aaKnown RBP eCLIP15.04■□□□□ -0
HIF3A-201ENST00000244302 TRIM34Q9BYJ4 488 aa15.04■□□□□ -0
HIF3A-201ENST00000244302 GGA3Q9NZ52 723 aa15.04■□□□□ -0
HIF3A-201ENST00000244302 FAM83AQ86UY5 434 aa15.03■□□□□ -0
HIF3A-201ENST00000244302 MAD2L2Q9UI95 211 aa15.03■□□□□ -0
HIF3A-201ENST00000244302 V9GY48 417 aaPredicted RBP15.03■□□□□ -0
HIF3A-201ENST00000244302 FRMPD2Q68DX3 1309 aaPredicted RBP15.03■□□□□ -0
HIF3A-201ENST00000244302 A0A1W2PRG0 241 aa15.02■□□□□ -0
HIF3A-201ENST00000244302 RAD21O60216 631 aa15.02■□□□□ -0
HIF3A-201ENST00000244302 EEF2P13639 858 aaKnown RBP15.02■□□□□ -0
HIF3A-201ENST00000244302 NOVP48745 357 aa15.02■□□□□ -0
HIF3A-201ENST00000244302 TPRNQ4KMQ1 711 aa15.02■□□□□ -0
HIF3A-201ENST00000244302 UBA5Q9GZZ9 404 aa15.02■□□□□ -0
HIF3A-201ENST00000244302 GZF1Q9H116 711 aaPredicted RBP15.02■□□□□ -0
HIF3A-201ENST00000244302 POLR2AP24928 1970 aaKnown RBP15.02■□□□□ -0
HIF3A-201ENST00000244302 ADAMTS3O15072 1205 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 CYTH3O43739 400 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 F13A1P00488 732 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms