RNA–Protein interactions for RNA: ENST00000172229.7

NGFR-201, Transcript of nerve growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NGFR, Length 3,417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGFR-201ENST00000172229 SRBD1Q8N5C6 995 aaKnown RBP18.86■□□□□ 0.61
NGFR-201ENST00000172229 TAB2Q9NYJ8 693 aa18.86■□□□□ 0.61
NGFR-201ENST00000172229 SIPA1L3O60292 1781 aaPredicted RBP18.85■□□□□ 0.61
NGFR-201ENST00000172229 TSPY3P0CV98 308 aa18.85■□□□□ 0.61
NGFR-201ENST00000172229 TSPY8P0CW00 308 aa18.85■□□□□ 0.61
NGFR-201ENST00000172229 PTPREP23469 700 aa18.85■□□□□ 0.61
NGFR-201ENST00000172229 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
NGFR-201ENST00000172229 PUF60Q9UHX1 559 aaKnown RBP18.85■□□□□ 0.61
NGFR-201ENST00000172229 N4BP2Q86UW6 1770 aaPredicted RBP18.85■□□□□ 0.61
NGFR-201ENST00000172229 CCDC194A0A1B0GVG4 234 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 N4BP3O15049 544 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 TOGARAM2Q6ZUX3 1019 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 FAM170AA1A519 330 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 TPTE2Q6XPS3 522 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 CCDC12Q8WUD4 166 aaPredicted RBP18.84■□□□□ 0.61
NGFR-201ENST00000172229 STRCP1A6NGW2 1772 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 NFIXQ14938 502 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 GRIK5Q16478 980 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 INF2Q27J81 1249 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 TNS2Q63HR2 1409 aa18.84■□□□□ 0.61
NGFR-201ENST00000172229 A0A0U1RQJ8 604 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 SOWAHDA6NJG2 315 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 ALX1Q15699 326 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 FBXO38Q6PIJ6 1188 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 ATRIPQ8WXE1 791 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 HINFPQ9BQA5 517 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 UBA5Q9GZZ9 404 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 DCP1AQ9NPI6 582 aaPredicted RBP18.83■□□□□ 0.61
NGFR-201ENST00000172229 HPSEQ9Y251 543 aa18.83■□□□□ 0.61
NGFR-201ENST00000172229 RTCBQ9Y3I0 505 aaKnown RBP18.83■□□□□ 0.61
NGFR-201ENST00000172229 USP54Q70EL1 1684 aa18.83■□□□□ 0.6
NGFR-201ENST00000172229 IGSF22Q8N9C0 903 aa18.83■□□□□ 0.6
NGFR-201ENST00000172229 COL18A1P39060 1754 aa18.83■□□□□ 0.6
NGFR-201ENST00000172229 LDHBP07195 334 aaKnown RBP18.83■□□□□ 0.6
NGFR-201ENST00000172229 CLEC10AQ8IUN9 316 aa18.83■□□□□ 0.6
NGFR-201ENST00000172229 ZNF384Q8TF68 577 aa18.83■□□□□ 0.6
NGFR-201ENST00000172229 SHISA4Q96DD7 197 aa18.83■□□□□ 0.6
NGFR-201ENST00000172229 NUP88Q99567 741 aaPredicted RBP18.83■□□□□ 0.6
NGFR-201ENST00000172229 MARCH6O60337 910 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 RIOK1Q9BRS2 568 aaKnown RBP18.82■□□□□ 0.6
NGFR-201ENST00000172229 FOXP1Q9H334 677 aaPredicted RBP18.82■□□□□ 0.6
NGFR-201ENST00000172229 GDAQ9Y2T3 454 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 SPATA31A1Q5TZJ5 1347 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 LETM2Q2VYF4 491 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 AMOTL1Q8IY63 956 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 SH3RF3Q8TEJ3 882 aaPredicted RBP18.82■□□□□ 0.6
NGFR-201ENST00000172229 ZNF804BA4D1E1 1349 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 RTL9Q8NET4 1388 aa18.82■□□□□ 0.6
NGFR-201ENST00000172229 SEC31AO94979 1220 aaKnown RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 TFRCP02786 760 aaKnown RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 KMT5BQ4FZB7 885 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 MEX3CQ5U5Q3 659 aaKnown RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 NSUN4Q96CB9 384 aaKnown RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 ZNF512BQ96KM6 892 aaPredicted RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 SSBP05455 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
NGFR-201ENST00000172229 CD44P16070 742 aaKnown RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 CASQ1P31415 396 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 PNMA1Q8ND90 353 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 DACH1Q9UI36 760 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 TUBE1Q9UJT0 475 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 ZNF142P52746 1687 aaPredicted RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 G3V3G9 751 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 SLURP2P0DP57 97 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 STAT6P42226 847 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 FILIP1LQ4L180 1135 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 DCAF8Q5TAQ9 597 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 HSD3B7Q9H2F3 369 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 BSDC1Q9NW68 430 aaPredicted RBP18.81■□□□□ 0.6
NGFR-201ENST00000172229 IMPACTQ9P2X3 320 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
NGFR-201ENST00000172229 CUL4BQ13620 913 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 PKN1Q16512 942 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 JAKMIP3Q5VZ66 844 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 VSTM4Q8IW00 320 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
NGFR-201ENST00000172229 PPP2R2CQ9Y2T4 447 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 SRPRBQ9Y5M8 271 aaKnown RBP18.8■□□□□ 0.6
NGFR-201ENST00000172229 GTF2F1P35269 517 aaKnown RBP eCLIP18.8■□□□□ 0.6
NGFR-201ENST00000172229 PAGE5Q96GU1 130 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 OSBPL5Q9H0X9 879 aaPredicted RBP18.8■□□□□ 0.6
NGFR-201ENST00000172229 INTS13Q9NVM9 706 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 CGNQ9P2M7 1197 aaKnown RBP18.8■□□□□ 0.6
NGFR-201ENST00000172229 TRIM49BA6NDI0 452 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 UBA7P41226 1012 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 SPECC1LQ69YQ0 1117 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 WDR24Q96S15 920 aa18.8■□□□□ 0.6
NGFR-201ENST00000172229 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
NGFR-201ENST00000172229 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 SCG2P13521 617 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 SEC23AQ15436 765 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 CCDC178Q5BJE1 867 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 TRERF1Q96PN7 1200 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
NGFR-201ENST00000172229 IKBKBO14920 756 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 UFL1O94874 794 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 ETF1P62495 437 aaKnown RBP18.79■□□□□ 0.6
NGFR-201ENST00000172229 USP17L2Q6R6M4 530 aa18.79■□□□□ 0.6
NGFR-201ENST00000172229 FAM196AQ6ZSG2 479 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms