RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Tdo2P48776 406 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Nlrp1aQ2LKU9 1182 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 EsrrbQ61539 433 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Tubb2aQ7TMM9 445 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Mylk2Q8VCR8 613 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Tubb2bQ9CWF2 445 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Osbpl5Q9ER64 874 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Skor2A7M7C7 1008 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Gm2030D3Z7C4 212 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Ccdc152E9PX14 254 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Ppp1r12cQ3UMT1 782 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 4921530L21RikQ9CQ47 274 aa17.81■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 FanccP50652 591 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Ift20Q61025 132 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Trim6Q8BGE7 488 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Micall1Q8BGT6 870 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Ssfa2Q922B9 1252 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 SpopQ6ZWS8 374 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Tpcn2Q8BWC0 731 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Lin9Q8C735 542 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Gja10Q9WUS4 505 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Arhgap33Q80YF9 1305 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 MmeQ61391 750 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 KaznQ69ZS8 779 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Klhl7Q8BUL5 586 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 CtcfQ61164 736 aaKnown RBP17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Sorbs3Q9R1Z8 733 aa17.8■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Abcc12Q80WJ6 1366 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Atp6v0a2P15920 856 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Traf1P39428 409 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Chd1P40201 1711 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Pde8bE9Q4S1 865 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 S100bP50114 92 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Kif22Q3V300 660 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Nap1l4Q78ZA7 375 aaKnown RBP17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Noc2lQ9WV70 747 aaKnown RBP17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Hecw2Q6I6G8 1578 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 MypnQ5DTJ9 1315 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Lbhd1A0A087WPA0 259 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Rpl13P47963 211 aaKnown RBP17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Cdr2P97817 455 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Cct6bQ61390 531 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Q8BZJ8 459 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 MypopQ8R4U1 393 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Trmt44Q9D2Q2 713 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Col4a3bpQ9EQG9 624 aa17.79■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Rsph10bE9PYQ0 876 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Speer4f2E9Q366 295 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Pak1O88643 545 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Rbm43Q99J64 343 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Pold4Q9CWP8 107 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Dpf1Q9QX66 387 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Mroh7A2AVR2 1279 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Apol10bG3X9K7 334 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Bach2P97303 839 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Susd4Q8BH32 490 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Rnaseh2aQ9CWY8 301 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Cyp2c68K7N6C2 491 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Atp1a3Q6PIC6 1013 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Trim52Q8CDV4 233 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Apbb1ipQ8R5A3 670 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Clasp1Q80TV8 1535 aaKnown RBP17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Cyp2c69E9PXC3 491 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Cyp2c40P56657 491 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Kif1bpQ6ZPU9 617 aa17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 CltcQ68FD5 1675 aaKnown RBP17.78■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Lekr1B2RVN1 116 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Gm4340L7N2C4 268 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 PparaP23204 468 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Mybpc2Q5XKE0 1136 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Naa30Q8CES0 364 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Mettl5Q8K1A0 209 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Cdr1E9Q0B4 517 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Arl1P61211 181 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Eya3P97480 510 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Tmtc2Q56A06 836 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 RilpQ5ND29 369 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Gpcpd1Q8C0L9 675 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 HgsQ99LI8 775 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Copb2O55029 905 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 SkiQ60698 725 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Ppp1r37Q8BKR5 712 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 RpgrQ9R0X5 1001 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Aox1O54754 1333 aa17.77■□□□□ 0.44
Pcdh1-203ENSMUST00000160721 Usp19Q3UJD6 1360 aa17.77■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Vps33bP59016 617 aa17.77■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Asic2Q925H0 512 aa17.77■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Map3k9Q3U1V8 1077 aa17.77■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Syap1Q9D5V6 365 aa17.77■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 ByslO54825 436 aaKnown RBP17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Actn3O88990 900 aaKnown RBP17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 FerP70451 823 aa17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Prpf38aQ4FK66 312 aaKnown RBP17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Yars2Q8BYL4 472 aaKnown RBP17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Gm38392E9Q2A2 434 aa17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Cpb1B2RS76 415 aa17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Sox13Q04891 613 aa17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Stoml1Q8CI66 399 aa17.76■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Dpp8Q80YA7 892 aa17.75■□□□□ 0.43
Pcdh1-203ENSMUST00000160721 Prune1Q8BIW1 454 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms