RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Fstl1Q62356 306 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Gba2Q69ZF3 918 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Slc45a1Q8BIV7 751 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Fsd2Q8BZ52 692 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Tshz3Q8CGV9 1081 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 OplahQ8K010 1288 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Slc18a1Q8R090 521 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Srgap1Q91Z69 1062 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Slc34a2Q9DBP0 697 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Prkab1Q9R078 270 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Pdcd6ipQ9WU78 869 aaKnown RBP16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Znf638Q61464 1960 aaKnown RBP16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Dicer1Q8R418 1916 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Lipo1J3QME6 396 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Itgb7P26011 806 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Anapc15P60007 132 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Tshz1Q5DTH5 1084 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Sgsm2Q80U12 1005 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Cep55Q8BT07 462 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Dppa3Q8QZY3 150 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Ngly1Q9JI78 651 aa16.24■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Fbxl16A2RT62 479 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Prr16A3KMN5 304 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Gm29094F6Q785 221 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Ccnd3P30282 292 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Fam83hQ148V8 1209 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Eme2Q56A04 373 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Zbtb39Q6PDK0 712 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Riox2Q8CD15 465 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Calhm4Q8CE93 315 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Paf1Q8K2T8 535 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Defb15Q8R2I5 79 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Gpr108Q91WD0 569 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Nop2Q922K7 793 aaKnown RBP16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Clstn1Q9EPL2 979 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Brca1P48754 1812 aa16.23■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Prr14lE9Q7C4 1971 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Nmt2O70311 529 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Alppl2P24823 529 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Scg2Q03517 617 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Stxbp3Q60770 592 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Gm21985Q6P6P5 1106 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Dync1li2Q6PDL0 492 aaKnown RBP16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Gtf3c5Q8R2T8 520 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Pes1Q9EQ61 584 aaKnown RBP16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Tanc1Q0VGY8 1856 aa16.22■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Ulk4Q3V129 1303 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 A430078G23RikE9Q7Y4 484 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Stx8O88983 236 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Sfi1Q3UZY0 1216 aaKnown RBP16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 LrmpQ60664 539 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Ncaph2Q8BSP2 607 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Terb1Q8C0V1 768 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Pus7lQ8CE46 702 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Mbtps2Q8CHX6 515 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Bst2Q8R2Q8 172 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Itm2cQ91VK4 269 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Mov10l1Q99MV5 1187 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 WtapQ9ER69 396 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Tmem47Q9JJG6 181 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Fndc3c1Q6DFV6 1356 aa16.21■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Ptpn12P35831 775 aa16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Acsl1P41216 699 aa16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Prdm1Q60636 856 aa16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Rgl2Q61193 778 aa16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Supt20hQ7TT00 530 aaKnown RBP16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Hps6Q8BLY7 805 aa16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 MyocdQ8VIM5 935 aa16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Gmcl1Q920G9 524 aa16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Mettl16Q9CQG2 553 aaKnown RBP16.2■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Pde6aP27664 859 aa16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Hoxc10P31257 342 aa16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 SelpQ01102 768 aa16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Ipo8Q7TMY7 1010 aa16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Ms4a5Q810P8 197 aa16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Bri3bpQ8BXV2 253 aa16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Fez1Q8K0X8 392 aa16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Ccdc47Q9D024 483 aaKnown RBP16.19■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Myl3P09542 204 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Mtx1P47802 317 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Dnajc2P54103 621 aaKnown RBP16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 GclcP97494 637 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Sec23aQ01405 765 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Traf3ip1Q149C2 625 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Pls1Q3V0K9 630 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Sp4Q62445 782 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Haus6Q6NV99 933 aaKnown RBP16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Ints3Q7TPD0 1041 aaKnown RBP16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Kiaa1524Q8BWY9 907 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Plcg2Q8CIH5 1265 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Pspc1Q8R326 523 aaKnown RBP16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 BaatQ91X34 420 aa16.18■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Kcnb2A6H8H5 907 aa16.17■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Skint3A7TZF0 458 aa16.17■□□□□ 0.18
Ercc1-203ENSMUST00000160369 LdhaP06151 332 aaKnown RBP16.17■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Exosc10P56960 887 aaKnown RBP16.17■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Rnf216P58283 853 aa16.17■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Mansc4Q3UU94 337 aa16.17■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Tmtc2Q56A06 836 aa16.17■□□□□ 0.18
Ercc1-203ENSMUST00000160369 Recql4Q75NR7 1216 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms