RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Cct6aP80317 531 aaKnown RBP12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cep112Q5PR68 954 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Gja3Q64448 417 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Nlrp9aQ66X03 949 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cyp4x1Q6A152 507 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Olfr119Q7TRJ5 321 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Sptlc3Q8BG54 563 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Krtap5-3Q9D226 196 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Mfap3lQ9D3X9 409 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Klhl40Q9D783 621 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Simc1E9Q6E9 1354 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ap1g2O88512 791 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ddx49Q4FZF3 480 aaKnown RBP12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pram1Q6BCL1 675 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Gga3Q8BMI3 718 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Rasal3Q8C2K5 1041 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Vps53Q8CCB4 832 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Klhl10Q9D5V2 608 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Tpcn1Q9EQJ0 817 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Gm5580A0A0N4SVP8 411 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cnbd1B1AWM0 430 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Foxn2E9Q7L6 429 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Hmgb1P63158 215 aaKnown RBP12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Meis3P97368 378 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Fam89aQ14BJ1 175 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Prpf38aQ4FK66 312 aaKnown RBP12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pde1cQ64338 706 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cep85Q8BMK0 761 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ano2Q8CFW1 1002 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Gm28042B7ZCM9 1014 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Acad12D3Z7X0 555 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Nck2O55033 380 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Rnf40Q3U319 1001 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Apol10aQ8CCA5 318 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 NapgQ9CWZ7 312 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Fam217aQ9D9W6 419 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Knop1Q9Z2Q2 478 aaKnown RBP12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ric1Q69ZJ7 1422 aa12.91□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ltbp4Q8K4G1 1666 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Rexo5D3YW29 759 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ccdc186Q8C9S4 917 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Krt222Q8CCX5 294 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Rtn1Q8K0T0 780 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Matr3Q8K310 846 aaKnown RBP12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Apobec3Q99J72 440 aaKnown RBP12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Card14Q99KF0 999 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Tmem39aQ9CYC3 486 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Fut8Q9WTS2 575 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Shank2Q80Z38 1476 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 NapbP28663 298 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Capza3P70190 299 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Fam107bQ3TGF2 131 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Zmym1Q3TJB1 983 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ppp1r7Q3UM45 361 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Otop3Q80UF9 577 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Armcx6Q8K3A6 301 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Nod2Q8K3Z0 1020 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Eif3cQ8R1B4 911 aaKnown RBP12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 AtrnQ9WU60 1428 aa12.9□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Scgb2b18A0A087WPA9 112 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Anks1bQ8BIZ1 1259 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 TxlnbQ8VBT1 685 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ccdc47Q9D024 483 aaKnown RBP12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Gm21680A0A0G2JGR8 267 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Gm6588E9Q3K0 461 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Pla2g4aP47713 748 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Tcp11Q01755 566 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Gjb4Q02738 266 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Sycp1Q62209 993 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Trim52Q8CDV4 233 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Rbm28Q8CGC6 750 aaKnown RBP12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ndufb9Q9CQJ8 179 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Foxo3Q9WVH4 672 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Stk39Q9Z1W9 556 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Myh1Q5SX40 1942 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Sipa1l2Q80TE4 1722 aa12.89□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ampd3O08739 766 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 CrcpO35427 148 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Zfpm1O35615 995 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Abcd1P48410 736 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 VeztQ3ZK22 780 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 RragbQ6NTA4 374 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Lrrd1Q8C0R9 853 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Krt84Q99M73 603 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Krt23Q99PS0 422 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Egfl6Q9JJZ5 550 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Trp53inp1Q9QXE4 239 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 AmfrQ9R049 643 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Sorbs3Q9R1Z8 733 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Krt24A1L317 512 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cul4bA2A432 970 aaKnown RBP12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 PparaP23204 468 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Plekhf1Q3TB82 279 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ccdc33Q3ULW6 985 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Sval3Q76I99 144 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Epn1Q80VP1 575 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Calcoco1Q8CGU1 691 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ints5Q8CHT3 1018 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Tspyl4Q8VD63 406 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Rbm43Q99J64 343 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 75.7 ms