RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 Smc1bQ920F6 1248 aa13.77□□□□□ -0.21
Lig1-201ENSMUST00000098814 Col20a1Q923P0 1320 aa13.77□□□□□ -0.21
Lig1-201ENSMUST00000098814 Scgb2b18A0A087WPA9 112 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Cyp2j7A0A140T8U1 504 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Speer4dL7N216 212 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 HdgfP51859 237 aaKnown RBP13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Tubb4bP68372 445 aaKnown RBP13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Sec23aQ01405 765 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 CtcfQ61164 736 aaKnown RBP13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Tas2r124Q7M718 309 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ube3cQ80U95 1083 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Nop9Q8BMC4 636 aaKnown RBP13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Mical1Q8VDP3 1048 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Brms1Q99N20 246 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Zfand4D3Z3C6 739 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Scgb2b19J3QM75 112 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Atp8b1Q148W0 1251 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Sun3Q5SS91 320 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Rnf41Q8BH75 317 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Cdhr2E9Q7P9 1308 aa13.76□□□□□ -0.21
Lig1-201ENSMUST00000098814 Dennd3A2RT67 1274 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Rexo5D3YW29 759 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Fkbp1aP26883 108 aaKnown RBP13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ica1lQ3TY65 431 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Fhod1Q6P9Q4 1197 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Apol10aQ8CCA5 318 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Hexim1Q8R409 356 aaKnown RBP13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Krt86P97861 486 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Nek5Q7TSC3 627 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Txndc5Q91W90 417 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Lrrc59Q922Q8 307 aaKnown RBP13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 NapgQ9CWZ7 312 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Eif4enif1Q9EST3 983 aaKnown RBP13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Efcc1Q9JJF6 558 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Tob2Q9JM55 345 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ulk4Q3V129 1303 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Fer1l6E0CZ42 1862 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Tnni2P13412 182 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ppp2r5bQ6PD28 497 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Gga3Q8BMI3 718 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Olfm5Q8BU90 496 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ttc12Q8BW49 704 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 ApobrQ8VBT6 942 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Cbx8Q9QXV1 362 aa13.75□□□□□ -0.21
Lig1-201ENSMUST00000098814 Zbtb7aO88939 569 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Vsnl1P62761 191 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 LbrQ3U9G9 626 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 ItgadQ3V0T4 1168 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Cep112Q5PR68 954 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Tsr1Q5SWD9 803 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Adam6bQ6IMH7 756 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Smarca1Q6PGB8 1046 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Igsf3Q6ZQA6 1194 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Lrrc1Q80VQ1 524 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Gdap1l1Q8VE33 370 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 RabggtaQ9JHK4 567 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Egfl6Q9JJZ5 550 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Chaf1aQ9QWF0 911 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Uso1Q9Z1Z0 959 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Znf638Q61464 1960 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 MycnP03966 462 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 GpiP06745 558 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Slc20a2Q80UP8 656 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Zswim4Q8C7B8 1101 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ufl1Q8CCJ3 793 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Krt222Q8CCX5 294 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ccdc73Q8CDM4 1066 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Sh2b1Q91ZM2 756 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Prpf3Q922U1 683 aaKnown RBP13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Uchl5Q9WUP7 329 aa13.74□□□□□ -0.21
Lig1-201ENSMUST00000098814 Igsf9bE9PZ19 1328 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Tbc1d2B1AVH7 922 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 IkbkbO88351 757 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Nkx2-5P42582 318 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Rad23bP54728 416 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 MmeQ61391 750 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Otop3Q80UF9 577 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Fam161bQ8CB59 589 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 E2f4Q8R0K9 410 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Pcdha12Q91Y18 950 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Kif23E9Q5G3 953 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Snrpa1P57784 255 aaKnown RBP13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 DSCC1Q14AI0 399 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Cct6bQ61390 531 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Kif1bpQ6ZPU9 617 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Pip4k2bQ80XI4 416 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Bap1Q99PU7 728 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Fam217aQ9D9W6 419 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Zcchc17Q9ESX4 241 aaKnown RBP13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Dpf1Q9QX66 387 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Abhd2Q9QXM0 425 aa13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Pdcd6ipQ9WU78 869 aaKnown RBP13.73□□□□□ -0.21
Lig1-201ENSMUST00000098814 Rgs22G3UYX5 1258 aa13.72□□□□□ -0.21
Lig1-201ENSMUST00000098814 PcQ05920 1178 aa13.72□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ccdc114Q3UX62 658 aa13.72□□□□□ -0.21
Lig1-201ENSMUST00000098814 RragbQ6NTA4 374 aa13.72□□□□□ -0.21
Lig1-201ENSMUST00000098814 Rbm28Q8CGC6 750 aaKnown RBP13.72□□□□□ -0.21
Lig1-201ENSMUST00000098814 Ubac1Q8VDI7 409 aa13.72□□□□□ -0.21
Lig1-201ENSMUST00000098814 Calml3Q9D6P8 149 aa13.72□□□□□ -0.21
Lig1-201ENSMUST00000098814 Copb1Q9JIF7 953 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 141.8 ms