RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Pola2P33611 600 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 MyzapQ3UIJ9 466 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Slx1bQ8BX32 270 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rasal3Q8C2K5 1041 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Pus7lQ8CE46 702 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Klhl10Q9D5V2 608 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Lmbr1Q9JIT0 490 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Map7d2A2AG50 781 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Zfand4D3Z3C6 739 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gnat2P50149 354 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Krt86P97861 486 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Sec23aQ01405 765 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 SfswapQ3USH5 945 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Esco1Q69Z69 843 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ccp110Q7TSH4 1004 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Slc39a11Q8BWY7 342 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Bicdl2Q8CHW5 507 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Pcdha12Q91Y18 950 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Krtap5-3Q9D226 196 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cfap45Q9D9U9 551 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 DonsonQ9QXP4 560 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Bcl9lQ67FY2 1494 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Palm3A2TJV2 734 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rad23bP54728 416 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Evi5P97366 809 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ifit1bl2Q3U687 466 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Olfr118Q7TRJ6 321 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Dnph1Q80VJ3 173 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Sgpp1Q9JI99 430 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Scgb2b18A0A087WPA9 112 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gm5580A0A0N4SVP8 411 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gucy1a2F8VQK3 730 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Mapkapk5O54992 473 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Stx8O88983 236 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 GabrdP22933 449 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 LbrQ3U9G9 626 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Arglu1Q3UL36 271 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Jakmip3Q5DTN8 844 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Usp50Q6P8X6 390 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Hgh1Q8C3I8 393 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Stn1Q8K2X3 378 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Zcchc17Q9ESX4 241 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Itga2bQ9QUM0 1033 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 AmfrQ9R049 643 aa11.09□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 4931408C20RikE9PWP9 1381 aa11.08□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 4932429P05RikA2ADI4 785 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Pde4dQ01063 747 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 IntuQ059U7 942 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ccdc34Q3UI66 367 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Prdm4Q80V63 803 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Hpcal4Q8BGZ1 191 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cdc23Q8BGZ4 597 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Bap1Q99PU7 728 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rcan1Q9JHG6 198 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Egfl6Q9JJZ5 550 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 MetP16056 1379 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Shank3Q4ACU6 1730 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 MarcksP26645 309 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ctnna3Q65CL1 895 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 LarsQ8BMJ2 1178 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ppfibp1Q8C8U0 969 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Efcab8Q8C9R9 203 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Hexim1Q8R409 356 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Sipa1l3G3X9J0 1776 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Lrp6O88572 1613 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 1700029H14RikE9PY36 240 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Pth1rP41593 591 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Abcd1P48410 736 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Chp1P61022 195 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cnga2Q62398 664 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Phc3Q8CHP6 981 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Dact1Q8R4A3 778 aa11.08□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Pbx1P41778 430 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ehmt1Q5DW34 1296 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cep112Q5PR68 954 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rbm15bQ6PHZ5 887 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 NelfbQ8C4Y3 580 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Nup133Q8R0G9 1155 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rrp1bQ91YK2 724 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Smc1bQ920F6 1248 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 NgdnQ9DB96 315 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rai14Q9EP71 979 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cbx8Q9QXV1 362 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Col20a1Q923P0 1320 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cyp26c1B2RXA7 518 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Olfr121Q5CZY0 321 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gpt2Q8BGT5 522 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cyp4f39Q8BGU0 532 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cfap69Q8BH53 942 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Arap2Q8BZ05 1703 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Phldb2Q8K1N2 1249 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Trim29Q8R2Q0 587 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Brms1Q99N20 246 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 ParvgQ9ERD8 331 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Mapk8ip1Q9WVI9 707 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Irs4Q9Z0Y7 1216 aa11.07□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Stat5bP42232 786 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Vsnl1P62761 191 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tacc1Q6Y685 774 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rassf4Q8CB96 322 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms