RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Sel1lQ9Z2G6 790 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 CpdO89001 1377 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ppfia4B8QI36 1187 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Pla2g4aP47713 748 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Slc12a2P55012 1205 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ccdc122Q8BVN0 290 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ciao1Q99KN2 339 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ubr1O70481 1757 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ddx49Q4FZF3 480 aaKnown RBP16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ufl1Q8CCJ3 793 aaKnown RBP16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Uap1Q91YN5 522 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Cnpy3Q9DAU1 276 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Kank3Q9Z1P7 791 aa16.97■□□□□ 0.31
Usp4-201ENSMUST00000035237 Wdr19Q3UGF1 1341 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 4932429P05RikA2ADI4 785 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Prr16A3KMN5 304 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Prl3d1P18121 224 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ccnl1Q52KE7 532 aaKnown RBP16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Erlin2Q8BFZ9 340 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Gfpt1P47856 697 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 HmmrQ00547 794 aaKnown RBP16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Tsr1Q5SWD9 803 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Als2cr12Q8BVM7 383 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Dnajc5gQ8C632 165 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Dbndd2Q9CRD4 158 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 KynuQ9CXF0 464 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 SyncQ9EPM5 470 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Irx5Q9JKQ4 484 aa16.96■□□□□ 0.31
Usp4-201ENSMUST00000035237 Ahnak2E9PYB0 1738 aaKnown RBP16.96■□□□□ 0.3
Usp4-201ENSMUST00000035237 Fam186bD3Z420 943 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Speer4dL7N216 212 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Cyp2d9P11714 504 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Atp8a2P98200 1148 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Znf697Q569E7 569 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 ErmnQ5EBJ4 281 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Olfr119Q7TRJ5 321 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Sptlc3Q8BG54 563 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Rnf34Q99KR6 376 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Rims2Q9EQZ7 1530 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Sall1Q9ER74 1322 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 NpcdF8VQB8 469 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Lig3P97386 1015 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 D130040H23RikQ8BII3 405 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Dnajc17Q91WT4 303 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Ehd4Q9EQP2 541 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Plekho1Q9JIY0 408 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Pard3Q99NH2 1333 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Plekhd1B2RPU2 505 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Gm5934D3Z4U6 212 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Cct6bQ61390 531 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Tas2r124Q7M718 309 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Six6os1Q9CTN5 574 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Trp53inp1Q9QXE4 239 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Itsn1Q9Z0R4 1714 aa16.95■□□□□ 0.3
Usp4-201ENSMUST00000035237 Zfand4D3Z3C6 739 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 March6Q6ZQ89 909 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Adcy2Q80TL1 1090 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Dnph1Q80VJ3 173 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Ccdc186Q8C9S4 917 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Trim52Q8CDV4 233 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Washc1Q8VDD8 475 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Nup153E9Q3G8 1462 aaKnown RBP16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Atp8b5A3FIN4 1183 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Apol7aB2RT54 418 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Zbtb7aO88939 569 aaKnown RBP16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Tpp1O89023 562 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Prl7d1P04769 244 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 NntQ61941 1086 aaKnown RBP16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Irak1Q62406 710 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 RalylQ8BTF8 293 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Ubxn1Q922Y1 297 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 LpxnQ99N69 386 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Casz1Q9CWL2 1761 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 PplQ9R269 1755 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 ErmardE9Q048 622 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Nkx2-5P42582 318 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Arhgef2Q60875 985 aa16.94■□□□□ 0.3
Usp4-201ENSMUST00000035237 Tex13c2A0A0G2JGA3 530 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Ssrp1Q08943 708 aaKnown RBP16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Rbm12b2Q66JV4 834 aaKnown RBP16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Glis3Q6XP49 780 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Spata4Q8K3V1 295 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 TnrQ8BYI9 1358 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Gm28919A0A087WP35 240 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 CltaO08585 235 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Meis3P97368 378 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Atp8b1Q148W0 1251 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 ZyxQ62523 564 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Col16a1Q8BLX7 1580 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Setdb1O88974 1307 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Gm28510A0A087WP28 240 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Rexo5D3YW29 759 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Zc3h13E9Q784 1729 aaKnown RBP16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 AK157302I3ITR1 129 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Asic1Q6NXK8 526 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Hps6Q8BLY7 805 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Shisa4Q8CA71 197 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Phc3Q8CHP6 981 aa16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Ccdc43Q9CR29 222 aaKnown RBP16.93■□□□□ 0.3
Usp4-201ENSMUST00000035237 Sf3a3Q9D554 501 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms