RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ier5O89113 308 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Hspa8P63017 646 aaKnown RBP15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Trim80Q3V061 624 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gngt2Q61017 69 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 ScocQ78YZ6 125 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Rps6kb1Q8BSK8 525 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Farp2Q91VS8 1065 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Pcyt1aP49586 367 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Hgh1Q8C3I8 393 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 RestQ8VIG1 1082 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Cyp2ab1S4R196 498 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 DgkiD3YWQ0 1071 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gm6121L7MUF1 212 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gm4758L7N258 96 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Tmtc1Q3UV71 942 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Itih3Q61704 889 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Casp2P29594 452 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Wdr70Q3TWF6 657 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Tsr1Q5SWD9 803 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Psip1Q99JF8 528 aaKnown RBP15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gdpd2Q9ESM6 539 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Mx1P09922 631 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 RpsaP14206 295 aaKnown RBP15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Liat1Q810M6 228 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Olfm5Q8BU90 496 aa15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Akap17bA2A3V1 959 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Kifc2O08672 792 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Daam1Q8BPM0 1077 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Arhgap18Q8K0Q5 663 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Zcchc8Q9CYA6 709 aaKnown RBP15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Snx1Q9WV80 522 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Lrriq1Q0P5X1 1673 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Krt80Q0VBK2 452 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Pls1Q3V0K9 630 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Dzip3Q7TPV2 1204 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Rnf14Q9JI90 485 aa15.33■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Bst2Q8R2Q8 172 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ube3bQ9ES34 1070 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Clec11aO88200 328 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Actn3O88990 900 aaKnown RBP15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 CopeO89079 308 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Lcmt1A0A0U1RNF2 332 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Plxnc1Q9QZC2 1574 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Kdm5bQ80Y84 1544 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Mroh9G5E8L9 891 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Rtel1Q0VGM9 1203 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pnma5Q5DTT8 618 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Rassf6Q80UQ2 353 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Sde2Q8K1J5 448 aaKnown RBP15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Sytl1Q99N80 567 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Slc27a3O88561 667 aa15.33■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Bcap29Q61334 240 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 AdpgkQ8VDL4 496 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Catsper1Q91ZR5 686 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Trim71Q1PSW8 855 aaKnown RBP15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Tor4aQ8BH02 426 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Serpinb6eI7HJI3 429 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Il4rP16382 810 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Mybl2P48972 704 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Adcy8P97490 1249 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Trim35Q8C006 501 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ap1b1O35643 943 aaKnown RBP15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Stx2Q00262 289 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Wdr93Q402B2 695 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Arid3aQ62431 601 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Palm2Q8BR92 376 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Krt5Q922U2 580 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Slc13a1Q9JHI4 594 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Map3k7Q62073 579 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ccdc154Q6RUT8 657 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Abtb2Q7TQI7 1024 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Mylk2Q8VCR8 613 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Tmtc2Q56A06 836 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Utp18Q5SSI6 552 aaKnown RBP15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Osbpl5Q9ER64 874 aa15.32■□□□□ 0.04
Col5a1-201ENSMUST00000028280 CaluO35887 315 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 GancQ8BVW0 898 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pomgnt1Q91X88 660 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Gstt4Q9D4P7 240 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Talpid3E9PV87 1520 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 LdhaP06151 332 aaKnown RBP15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Zfp781Q0P5U5 243 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Gm1604bQ3TRG0 118 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Zfp202Q8C879 641 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Efcab8Q8C9R9 203 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Kdm4cQ8VCD7 1054 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ndc80Q9D0F1 642 aaKnown RBP15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 PtprkP35822 1457 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Nfkbil1O88995 381 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Card10P58660 1021 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 GnpatP98192 678 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Mrps22Q9CXW2 359 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Sall3Q62255 1320 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Grin2aP35436 1464 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Rint1Q8BZ36 792 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 4930449I24RikQ9D5E3 319 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Srrm1Q52KI8 946 aaKnown RBP15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 NostrinQ6WKZ7 506 aa15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Syf2Q9D198 242 aaKnown RBP15.31■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Psma7Q9Z2U0 248 aa15.31■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 88.9 ms