RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Srgap2Q91Z67 1071 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Ribc1Q9D0B8 379 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Vps33aQ9D2N9 598 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Nrxn1Q9CS84 1514 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 LbrQ3U9G9 626 aaKnown RBP14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Nab2Q61127 525 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Krt15Q61414 452 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Cap2Q9CYT6 476 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Depdc5P61460 1591 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Cdk12Q14AX6 1484 aaKnown RBP14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Dcaf17Q3TUL7 519 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Mkrn3Q60764 544 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Fchsd1Q6PFY1 688 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 D130040H23RikQ8BII3 405 aa14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Atp1a1Q8VDN2 1023 aaKnown RBP14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Akap8Q9DBR0 687 aaKnown RBP14.15□□□□□ -0.14
Msh6-201ENSMUST00000005503 Ess2O70279 479 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Tnnc1P19123 161 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Hpcal4Q8BGZ1 191 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Dclk3Q8BWQ5 790 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Gramd4Q8CB44 633 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Phldb3E9QAF4 648 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Adssl1P28650 457 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Mybpc2Q5XKE0 1136 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Mtss1lQ6P9S0 715 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 RbsnQ80Y56 783 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Lrrc45Q8CIM1 670 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Gimap7Q8R379 293 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 SncbQ91ZZ3 133 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Trim59Q922Y2 403 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Syce1Q9D495 329 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 PtprmP28828 1452 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Med23Q80YQ2 1367 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Kifc2O08672 792 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Exosc10P56960 887 aaKnown RBP14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Sval3Q76I99 144 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Zfyve16Q80U44 1528 aa14.14□□□□□ -0.15
Msh6-201ENSMUST00000005503 Abcc12Q80WJ6 1366 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Nf2P46662 596 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Tcp11Q01755 566 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Drc1Q3USS3 753 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Lig3P97386 1015 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Skap2Q3UND0 358 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Dpf2Q61103 391 aaKnown RBP14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Nlrp9bQ66X22 1003 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Rasgrp4Q8BTM9 673 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ctage5Q8R311 779 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Pex3Q9QXY9 372 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Rbm12b2Q66JV4 834 aaKnown RBP14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Sh3d21Q7TSG5 549 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Anks1bQ8BIZ1 1259 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Slc4a8Q8JZR6 1089 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 Efhd1Q9D4J1 240 aa14.13□□□□□ -0.15
Msh6-201ENSMUST00000005503 MybP06876 636 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Plbd2Q3TCN2 594 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Oxr1Q4KMM3 866 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Usp49Q6P9L4 685 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ces1dQ8VCT4 565 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Cabp7Q91ZM8 215 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ccdc89Q9DA73 370 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ube3bQ9ES34 1070 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Dnm2P39054 870 aaKnown RBP14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Nap1l2P51860 460 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Gm5935Q497S0 212 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 NntQ61941 1086 aaKnown RBP14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Arfgap2Q99K28 520 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Thap2Q9D305 217 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Cnpy3Q9DAU1 276 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 CemipQ8BI06 1361 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Gna11P21278 359 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Gna15P30678 374 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Slc12a2P55012 1205 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 RgmbQ7TQ33 436 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Sec24cG3X972 1096 aaKnown RBP14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Pls1Q3V0K9 630 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 EsrrbQ61539 433 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Rab11fip4Q8BQP8 635 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Dnajc14Q921R4 703 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Lrrc59Q922Q8 307 aaKnown RBP14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Mis18aQ9CZJ6 204 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Acsl3Q9CZW4 720 aaKnown RBP14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Abca8bQ8K440 1620 aa14.12□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ap1g2O88512 791 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Nek1P51954 1203 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Terf1P70371 421 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ift20Q61025 132 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ccpg1Q640L3 753 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Sde2Q8K1J5 448 aaKnown RBP14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Mfap3lQ9D3X9 409 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Cyp7b1Q60991 507 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ift74Q8BKE9 600 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Znf287Q9EQB9 759 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 NhsB1AV60 1647 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Prex1Q69ZK0 1650 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Mcm5P49718 733 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 ClasrpQ8CFC7 668 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 Kif17Q99PW8 1038 aa14.11□□□□□ -0.15
Msh6-201ENSMUST00000005503 E9QMW4 1145 aa14.1□□□□□ -0.15
Msh6-201ENSMUST00000005503 Scaf1Q5U4C3 1256 aaKnown RBP14.1□□□□□ -0.15
Msh6-201ENSMUST00000005503 Ces3aQ63880 571 aa14.1□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms