RNA–Protein interactions for RNA: ENSMUST00000221654.1

Rnf220-212, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

TSL 1 (best) BASIC

Gene Rnf220, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-212ENSMUST00000221654 Gm20537G3UYK7 97 aa12.46□□□□□ -0.42
Rnf220-212ENSMUST00000221654 Sec61bQ9CQS8 96 aaKnown RBP12.43□□□□□ -0.42
Rnf220-212ENSMUST00000221654 Gm9955Q8CEJ8 102 aa12.4□□□□□ -0.42
Rnf220-212ENSMUST00000221654 1700042G07RikB1AUF7 90 aa12.37□□□□□ -0.43
Rnf220-212ENSMUST00000221654 PcloQ9QYX7 5068 aa12.36□□□□□ -0.43
Rnf220-212ENSMUST00000221654 2310057N15RikQ9D6T8 200 aa12.32□□□□□ -0.44
Rnf220-212ENSMUST00000221654 Pla2g10Q9QXX3 151 aa12.3□□□□□ -0.44
Rnf220-212ENSMUST00000221654 Lce1mQ9CR91 182 aa12.29□□□□□ -0.44
Rnf220-212ENSMUST00000221654 Krtap13-1Q8K198 168 aa12.26□□□□□ -0.45
Rnf220-212ENSMUST00000221654 Gm3880A0A1B0GSB3 72 aa12.13□□□□□ -0.47
Rnf220-212ENSMUST00000221654 Krtap1-5A2A590 122 aa12.07□□□□□ -0.48
Rnf220-212ENSMUST00000221654 Herc1E9PZP8 4859 aa12.01□□□□□ -0.49
Rnf220-212ENSMUST00000221654 BC029722A0A0N4SW31 51 aa11.99□□□□□ -0.49
Rnf220-212ENSMUST00000221654 Krtap16-3Q8C1I6 86 aa11.99□□□□□ -0.49
Rnf220-212ENSMUST00000221654 Fam229aB2KGE5 128 aa11.93□□□□□ -0.5
Rnf220-212ENSMUST00000221654 Krtap19-1Q925H2 87 aa11.88□□□□□ -0.51
Rnf220-212ENSMUST00000221654 Gm18596A0A1W2P860 280 aa11.83□□□□□ -0.52
Rnf220-212ENSMUST00000221654 Crct1Q6PAI5 102 aa11.8□□□□□ -0.52
Rnf220-212ENSMUST00000221654 Krtap19-3Q925H6 87 aa11.78□□□□□ -0.52
Rnf220-212ENSMUST00000221654 Gm10318A0A1W2P728 225 aa11.7□□□□□ -0.54
Rnf220-212ENSMUST00000221654 B930094E09RikQ8C4T2 136 aa11.67□□□□□ -0.54
Rnf220-212ENSMUST00000221654 Gm17402F6Z0L5 76 aa11.64□□□□□ -0.55
Rnf220-212ENSMUST00000221654 Gm12216A0A1W2P827 62 aa11.64□□□□□ -0.55
Rnf220-212ENSMUST00000221654 Romo1P60603 79 aa11.6□□□□□ -0.55
Rnf220-212ENSMUST00000221654 Ush2AQ2QI47 5193 aa11.54□□□□□ -0.56
Rnf220-212ENSMUST00000221654 Gm19426M0QWC7 77 aa11.53□□□□□ -0.56
Rnf220-212ENSMUST00000221654 Gm19402J3QJV4 266 aa11.52□□□□□ -0.56
Rnf220-212ENSMUST00000221654 Hmcn2A2AJ76 5100 aa11.5□□□□□ -0.57
Rnf220-212ENSMUST00000221654 Krtap1-3A2A588 173 aa11.48□□□□□ -0.57
Rnf220-212ENSMUST00000221654 Gm9789Q8BIG3 52 aa11.44□□□□□ -0.58
Rnf220-212ENSMUST00000221654 Prm1P02319 51 aa11.41□□□□□ -0.58
Rnf220-212ENSMUST00000221654 Sprr2a3Q4KL71 83 aa11.37□□□□□ -0.59
Rnf220-212ENSMUST00000221654 Sprr2a1Q9CQK8 83 aa11.37□□□□□ -0.59
Rnf220-212ENSMUST00000221654 Gm7735D3YX18 52 aa11.35□□□□□ -0.59
Rnf220-212ENSMUST00000221654 CriptO70333 101 aa11.35□□□□□ -0.59
Rnf220-212ENSMUST00000221654 Krtap1-4Q3V2D6 188 aa11.34□□□□□ -0.59
Rnf220-212ENSMUST00000221654 Spink7Q6IE32 76 aa11.33□□□□□ -0.6
Rnf220-212ENSMUST00000221654 Gm21887J3QQ04 176 aa11.32□□□□□ -0.6
Rnf220-212ENSMUST00000221654 ZanO88799 5376 aa11.31□□□□□ -0.6
Rnf220-212ENSMUST00000221654 4932415D10RikA0A1W2P6U8 4986 aa11.28□□□□□ -0.6
Rnf220-212ENSMUST00000221654 Ubr4A2AN08 5180 aa11.27□□□□□ -0.61
Rnf220-212ENSMUST00000221654 LorP18165 486 aa11.13□□□□□ -0.63
Rnf220-212ENSMUST00000221654 Rnf213E9Q555 5152 aaKnown RBP10.98□□□□□ -0.65
Rnf220-212ENSMUST00000221654 Lce1jD3YUU5 139 aa10.93□□□□□ -0.66
Rnf220-212ENSMUST00000221654 Fat4Q2PZL6 4981 aa10.92□□□□□ -0.66
Rnf220-212ENSMUST00000221654 Krtap12-1Q9Z287 130 aa10.9□□□□□ -0.67
Rnf220-212ENSMUST00000221654 Krtap19-9aF8WH65 55 aa10.82□□□□□ -0.68
Rnf220-212ENSMUST00000221654 Gm19668J3QMD1 248 aa10.7□□□□□ -0.7
Rnf220-212ENSMUST00000221654 Camk2n1Q6QWF9 78 aa10.68□□□□□ -0.7
Rnf220-212ENSMUST00000221654 Krtap7-1Q9D3I6 87 aa10.67□□□□□ -0.7
Rnf220-212ENSMUST00000221654 SspoQ8CG65 4998 aa10.63□□□□□ -0.71
Rnf220-212ENSMUST00000221654 Prm2P07978 107 aa10.56□□□□□ -0.72
Rnf220-212ENSMUST00000221654 Gm40193A0A1B0GT39 78 aa10.53□□□□□ -0.72
Rnf220-212ENSMUST00000221654 Krtap17-1A2A5X6 109 aa10.46□□□□□ -0.74
Rnf220-212ENSMUST00000221654 Krtap19-2Q925I0 141 aa10.46□□□□□ -0.74
Rnf220-212ENSMUST00000221654 Mp68P56379 58 aa10.41□□□□□ -0.74
Rnf220-212ENSMUST00000221654 Krtap9-5A2A5X3 358 aa10.37□□□□□ -0.75
Rnf220-212ENSMUST00000221654 Lce1iQ9D6P5 149 aa10.27□□□□□ -0.76
Rnf220-212ENSMUST00000221654 Gm10061D3Z714 54 aa10.25□□□□□ -0.77
Rnf220-212ENSMUST00000221654 Lce1a2Q9D1K4 149 aa10.17□□□□□ -0.78
Rnf220-212ENSMUST00000221654 Krtap8-1O08633 61 aa10.12□□□□□ -0.79
Rnf220-212ENSMUST00000221654 Gm20538F6Z9R1 75 aa9.99□□□□□ -0.81
Rnf220-212ENSMUST00000221654 Krtap19-9bQ99NG9 58 aa9.99□□□□□ -0.81
Rnf220-212ENSMUST00000221654 Muc5bE9Q5I3 4800 aa9.92□□□□□ -0.82
Rnf220-212ENSMUST00000221654 Tnp1P10856 55 aa9.89□□□□□ -0.83
Rnf220-212ENSMUST00000221654 Gm6358A0A087WPH4 74 aa9.84□□□□□ -0.83
Rnf220-212ENSMUST00000221654 Gm11569B1AQB1 180 aa9.76□□□□□ -0.85
Rnf220-212ENSMUST00000221654 Mt2P02798 61 aa9.7□□□□□ -0.86
Rnf220-212ENSMUST00000221654 Ndufaf8A2AMZ4 74 aa9.56□□□□□ -0.88
Rnf220-212ENSMUST00000221654 Krtap9-3Q3V2C1 136 aa9.49□□□□□ -0.89
Rnf220-212ENSMUST00000221654 2310046K23RikA0A0A6YVW6 87 aa9.46□□□□□ -0.9
Rnf220-212ENSMUST00000221654 Lce1hQ9D6R3 140 aa9.41□□□□□ -0.9
Rnf220-212ENSMUST00000221654 Krtap4-2B1AQ85 167 aa9.25□□□□□ -0.93
Rnf220-212ENSMUST00000221654 Lce1gQ9D195 139 aa9.19□□□□□ -0.94
Rnf220-212ENSMUST00000221654 Krtap22-2J3QNX6 67 aa9.15□□□□□ -0.94
Rnf220-212ENSMUST00000221654 Gm11562A0PK51 136 aa9.14□□□□□ -0.95
Rnf220-212ENSMUST00000221654 Gm11555B1AQ89 175 aa9.05□□□□□ -0.96
Rnf220-212ENSMUST00000221654 Mdn1A2ANY6 5589 aaKnown RBP8.99□□□□□ -0.97
Rnf220-212ENSMUST00000221654 Krtap4-6Q3V4B7 195 aa8.94□□□□□ -0.98
Rnf220-212ENSMUST00000221654 Syne2Q6ZWQ0 6874 aaKnown RBP8.9□□□□□ -0.99
Rnf220-212ENSMUST00000221654 Gm11596B1AQB0 205 aa8.88□□□□□ -0.99
Rnf220-212ENSMUST00000221654 Krtap4-1Q3UUY3 169 aa8.76□□□□□ -1.01
Rnf220-212ENSMUST00000221654 Gm10272F7CZ33 110 aa8.65□□□□□ -1.02
Rnf220-212ENSMUST00000221654 Gm11564A2A4L9 201 aa8.54□□□□□ -1.04
Rnf220-212ENSMUST00000221654 Gm11563B1AQ90 168 aa8.54□□□□□ -1.04
Rnf220-212ENSMUST00000221654 Gm11595B1AQA7 289 aa8.54□□□□□ -1.04
Rnf220-212ENSMUST00000221654 Krtap4-8B1AQA8 209 aa8.54□□□□□ -1.04
Rnf220-212ENSMUST00000221654 Sprr2gO70558 76 aa8.48□□□□□ -1.05
Rnf220-212ENSMUST00000221654 Lce1dQ9D731 133 aa8.48□□□□□ -1.05
Rnf220-212ENSMUST00000221654 Sprr2dO70555 85 aa8.41□□□□□ -1.06
Rnf220-212ENSMUST00000221654 Gm11938Q9D3H4 131 aa8.4□□□□□ -1.06
Rnf220-212ENSMUST00000221654 Gm9112A2AI92 75 aa8.33□□□□□ -1.08
Rnf220-212ENSMUST00000221654 Krtap4-9B1AQA9 244 aa8.3□□□□□ -1.08
Rnf220-212ENSMUST00000221654 Lce1eQ9D139 143 aa8.26□□□□□ -1.09
Rnf220-212ENSMUST00000221654 Mt4P47945 62 aa8.25□□□□□ -1.09
Rnf220-212ENSMUST00000221654 Lce1bQ9D149 137 aa8.15□□□□□ -1.1
Rnf220-212ENSMUST00000221654 4933428G20RikQ9D3X4 101 aa8.13□□□□□ -1.11
Rnf220-212ENSMUST00000221654 Fsip2A2ARZ3 6995 aa8.12□□□□□ -1.11
Rnf220-212ENSMUST00000221654 Syne1Q6ZWR6 8799 aa8.06□□□□□ -1.12
Rnf220-212ENSMUST00000221654 Gm38119A0A0A6YX29 146 aa8□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 110.1 ms